Actinokineospora auranticolor: V5P93_005478
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Entry
V5P93_005478 CDS
T10991
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aaur Actinokineospora auranticolor
Brite
KEGG Orthology (KO) [BR:
aaur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aaur03009
]
V5P93_005478 (rimO)
Enzymes [BR:
aaur01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
V5P93_005478 (rimO)
Ribosome biogenesis [BR:
aaur03009
]
Prokaryotic type
ribosomal protein modification factors
V5P93_005478 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
DUF3079
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XGP77915
LinkDB
All DBs
Position
complement(6334153..6335580)
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AA seq
475 aa
AA seq
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MLTLGCARNEVDSEEIAGRLSGGGWELVDLDEAAPDVIVVNTCGFVESAKKDSVDTLLAA
ADTGAKVVAVGCMAERYGAELADSLPEASAVLGFDHYPDLAERLGDVVAGHAVPSHVPVD
RRTLLPISPVERPAAQTEVSVPGHAWGPTVLRKRLDDGPVASLKIASGCDRRCSFCAIPS
FRGSFVSRHPDEIVAEGAWLAREGARELVLVSENSTSYGKDLGREHAGQGALEAVITRLA
AIPGIDRVRVSYLQPAETRPNLVRAIATTPGVADYFDMSFQHASETVLRRMRRFGNTESF
LGLVEQIRAHSPEAGIRSNVIVGFPGETEDDVAELVKFLTAARLDAVGVFGYSDEDGTEA
EKLDGKHDVDTVAARVARISALAEELTAQRAEDRIGTEVVVLVERAEDEDEDCVGRAAHQ
APEVDGECVVIDGPEGLESASFAVGDLVRARVVDTEGVDLIVEPIEIVQREPVSP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgctcggttgtgcccgcaacgaggtcgactccgaggagatcgcggggcggttg
tccggcggcgggtgggagctggtggacctcgacgaggccgcccccgacgtgatcgtggtc
aacacctgcgggttcgtcgagtcggccaagaaggactcggtggacacgctgctcgccgcg
gccgacaccggggccaaggtggtggccgtgggctgcatggccgagcgctacggcgccgag
ttggccgacagcctgcccgaggccagcgccgtgctcgggttcgaccactacccggacctg
gccgagcgcctcggcgacgtggtcgcggggcacgcggtgccctcgcacgtgcccgtcgac
cggcgcaccctgctgcccatctccccggtcgagcggcccgccgcgcagaccgaggtgagc
gttcccgggcacgcgtgggggccgacggtcctgcgcaagcggctcgacgacggtccggtg
gcctcgctcaagatcgcttccgggtgtgaccggcggtgctcgttctgcgcgatcccgagc
ttccgggggtcgttcgtgtcgcggcaccccgacgagatcgtcgccgagggcgcgtggctg
gcccgggagggcgcccgcgagctggtgctggtcagcgagaactccacctcgtacggcaag
gacctcggccgcgagcacgcgggccagggggcgctggaggcggtgatcacccggctggcc
gcgatacccggcatcgaccgggtccgggtgtcctacctgcagcccgccgagacccggccg
aacctggtgcgcgccatcgccaccacccccggggtcgccgactacttcgacatgtccttc
cagcacgccagcgagaccgtgctgcgccggatgcgccgcttcggcaacaccgagagcttc
ctcggcctggtcgagcagatccgcgcgcactccccggaggcgggcatccgcagcaacgtc
atcgtcgggttccccggtgagaccgaggacgacgtggcggagctggtcaagttcctcacc
gccgcccggctcgacgcggtcggcgtgttcggctactccgacgaggacggcaccgaggcc
gagaagctcgacggcaagcacgacgtggacaccgtcgccgcccgcgtcgcccggatctcc
gcgctcgccgaggagctgaccgcgcagcgcgccgaggaccggatcggcaccgaggtcgtc
gtgctcgtcgagcgcgcggaggacgaggacgaggactgcgtcggccgcgccgcccaccag
gcccccgaggtcgacggcgagtgcgtggtcatcgacggtcccgaaggcctggagagcgct
tccttcgcggtcggcgacctggtgcgtgcccgcgtcgtcgacaccgagggcgtcgacctg
atcgtggaacccatcgagatcgtccagcgcgaaccggtgtcgccgtga
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