Actinokineospora auranticolor: V5P93_005529
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Entry
V5P93_005529 CDS
T10991
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aaur Actinokineospora auranticolor
Brite
KEGG Orthology (KO) [BR:
aaur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aaur03016
]
V5P93_005529 (truB)
Enzymes [BR:
aaur01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
V5P93_005529 (truB)
Transfer RNA biogenesis [BR:
aaur03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
V5P93_005529 (truB)
Prokaryotic type
V5P93_005529 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XGP77966
LinkDB
All DBs
Position
6387609..6388520
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AA seq
303 aa
AA seq
DB search
MSSPEKRAPKRPPVPPGLVVVDKAPGMTSHDVVARARRIIGTRKVGHAGTLDPMATGVLV
LGIERATKLLGHLALDRKTYLANIHLGASTTTDDAEGEVLSTADASGVADEAIAAGIAAL
TGAIQQVPSSVSAVKVDGKRAYARVRAGEDVQLPARPVSVFRFDLLNTTREGGVVALDVM
VDCSSGTYVRALARDLGAALGVGGHLAALRRTTVGPFDLRMARTLEALEQEPGLSLDMEA
AVGAAFPRRDLDKVEAIALSHGKRIPAAGINGTYGIFDPAGKAVALGVDEGATARALVAL
NVP
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagccccgagaagcgcgccccgaagcgcccacccgtcccgcccggcctcgtcgtg
gtcgacaaggcgcccggcatgacctcgcacgacgtggtcgcccgggcgcggcggatcatc
ggcacccgcaaggtcggccacgcgggcacgctggacccgatggccaccggcgtgctggtg
ctgggcatcgagcgggccacgaagctgctggggcacctcgcgctcgaccgcaagacgtac
ctggccaacatccacctcggcgcgtcgaccaccaccgacgacgcggagggcgaggtgctc
tcgaccgccgacgcgtccggggtcgccgacgaggccatcgcggccgggatcgcggcgctg
accggcgccatccagcaggtgcccagttcggtgagcgcggtcaaggtcgacggcaagcgc
gcgtacgcccgggtccgcgcgggcgaggacgtccagctgcccgcccggccggtctcggtg
ttccggttcgacctgctcaacaccacgcgcgagggcggtgtggtggcactggacgtgatg
gtcgactgctcgtccggcacctacgtccgcgcgctggcccgcgacctgggcgcggccctg
ggcgtcggcgggcacctggcggcgctgcggcgcaccacggtcggcccgttcgacctgcgg
atggcgcgcacgctggaggcgctggagcaggagccggggctgtcgctggacatggaggcc
gcggtgggcgccgcgttcccgcgccgcgacctggacaaggtggaggcgatcgcgctctcg
cacggcaagcgcatcccggcggccgggatcaacggcacgtacggcatcttcgacccggcg
ggcaaagcggtggcgctgggcgtggacgagggcgcgacggcgcgggcgctggtggcgctg
aacgtgccctga
DBGET
integrated database retrieval system
