Alteromonas australica DE170: EP12_00575
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Entry
EP12_00575 CDS
T03858
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
aaus
Alteromonas australica DE170
Brite
KEGG Orthology (KO) [BR:
aaus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aaus03000
]
EP12_00575
Transcription factors [BR:
aaus03000
]
Prokaryotic type
Helix-turn-helix
LysR family
EP12_00575
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_20
HTH_11
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AJP42429
UniProt:
A0A075P1S2
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Position
complement(123892..124824)
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AA seq
310 aa
AA seq
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MRAILGNLSDTDIRLLRVFIVVAQAGGLSAAELELNIGRSTISRHLKDLETRLGMVLCHR
GRGGFALTEEGKRIYESTQRLLLSLQDFRNEVNDMHRHLQGNVVVAMFDKTVSNEACKVS
DAIYAYQQQAPNVNVEIHVVPVNTIEQGILDGRYHIGIIPTHRTSSSLHYLPLFGEQMYL
YCGAKHPLFSALGNIPDTAIRDAKYAGLSFHSPNMDKSMALGLNRMAVANDQEGIATLIC
SGSYLGFLPEHYAESFVGKGQMRAIEPANFAYHCDFAAIYRKSPKPTRLVKLFLDALARE
HGKEAIIADD
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccatcttaggtaatttatccgataccgatattcgtttattgcgggttttcatt
gtggttgctcaagccggaggcttgtcggcggcagaactagaactgaatattggacgctcc
accattagccgccatttaaaagatttggagacgcgattgggcatggtgctttgccatcga
ggcagaggcggctttgcgctcaccgaagaaggtaagcgtatttacgaatctacccagcgc
ttattgctatcccttcaagactttcgtaatgaagtgaatgacatgcaccgccacctgcag
ggaaatgtggtcgtggccatgtttgataaaaccgtgtctaacgaagcctgcaaagtaagc
gacgccatttatgcttatcagcagcaagcgcccaatgtgaatgtggaaatacatgttgtt
cctgtgaataccatagaacaaggtatacttgacggccgctaccatattggcattattcct
acccaccgtacctcatcaagcttgcactatctgcccttgtttggagagcagatgtacttg
tattgcggggcaaaacatccactttttagtgcgctggggaatattccagataccgctatt
cgtgatgccaaatacgcgggtttaagctttcatagcccaaatatggacaaaagcatggcc
cttggtttaaaccgaatggctgtggctaatgaccaagaagggatagcaacgttaatttgt
tcgggaagttacctgggctttttacccgagcactatgctgaatcctttgtgggcaaaggg
caaatgcgggcaatagaaccagcaaattttgcttatcactgcgactttgcggctatttat
cgaaagtcgcctaagcctacacgtttggtcaaattattcttagacgcgttagcgcgagaa
catggaaaagaagccatcattgctgacgattag
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