Alteromonas australica DE170: EP12_00975
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Entry
EP12_00975 CDS
T03858
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aaus
Alteromonas australica DE170
Pathway
aaus03420
Nucleotide excision repair
aaus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aaus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EP12_00975 (uvrD)
03430 Mismatch repair
EP12_00975 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaus03400
]
EP12_00975 (uvrD)
Enzymes [BR:
aaus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EP12_00975 (uvrD)
DNA repair and recombination proteins [BR:
aaus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EP12_00975 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
EP12_00975 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AJP42501
UniProt:
A0A075NVG9
LinkDB
All DBs
Position
complement(219280..221451)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSRLLDELNDKQREAVAAPLSNALVLAGAGSGKTRVLVHRIAWLMEVENITPFSILAV
TFTNKAAREMRGRIESLMGRSLHNMWIGTFHGLAHRLLRAHHAEAGLPENFQILDSDDQY
RLIKRILKAMNLDEKHWAPRQVQWYINGNKDEGLRPQHIETHGDHIQKKMREIYAAYQDA
CDRSGLVDFAELLLRAHELWAKNPDVLAHYQRRFRAVLVDEFQDTNNIQYAWLRMLCSGD
TNNIMIVGDDDQSIYGWRGANVDNIQHFLKDFDNPTTVRLEQNYRSTGNILKAANTVIDN
NTGRLGKELWTEDGQGELISVYAGFNELDEARFIVSKIKDWLHQGNALKDTAILYRNNAQ
SRVLEEALLHEGIAYRIYGGLRFFERQEIKDALGYLRMINHPHDDAAFERVVNTPSRGIG
EKTLSQVRETARAHNCSMWQASQLLINEKALKGRALNAMQSFALLISELEQATTEAPLEE
QADVAIRQSGLYAMYQAERGEKAQARLENLEELVTACKQFIVPEEAEEMTPLSAFLAHAS
LEAGEQQADKDQDAVQMMTIHTAKGLEFPLVFMAGVEEGMFPSQMTNDEPGRMEEERRLC
YVGMTRAMQKLYITYAESRRLYGQDKYHTASRFIKEIPADCVEEVRLRTTISRPVHNRFS
QATSHASFEDTGFQLGQRVVHRKFGEGIVLNYEGSGEHARVQVNFDEFGTKWLVLAYAKL
EQA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatccagactgcttgacgagctcaacgacaaacaacgtgaagcggtagctgcg
cccttatcaaatgcccttgtactggcaggcgccggtagtggtaaaacccgtgttttggtg
catcgtatagcctggttaatggaagtcgaaaacatcacgcccttctccatattagccgta
accttcaccaataaagcggccagagaaatgcgtggtcgtattgaatcgttaatgggtaga
agcttacacaacatgtggattggcacattccatggccttgcccaccgactgcttcgtgcc
caccacgcagaagcaggcttgccggaaaacttccagattcttgattctgacgatcaatat
cggcttattaaacgtattttaaaagccatgaatttagacgaaaaacactgggcgcctcgc
caagtgcaatggtacatcaacggcaataaagacgaaggtttacgtccgcaacatattgaa
acccatggcgatcacattcaaaagaagatgcgcgaaatatacgccgcatatcaagatgct
tgtgaccgctcaggccttgtcgactttgccgaattattattaagagcgcacgagctatgg
gccaagaacccagacgtattagcccactatcagcgccgttttcgtgcagtcttagtagac
gaatttcaagataccaataacattcaatatgcatggcttcgcatgttgtgcagcggcgac
accaacaatattatgattgtgggggatgatgaccagtctatctatggctggcgtggtgct
aacgtagacaatattcagcatttccttaaagatttcgacaacccaaccacggttcgtctt
gagcaaaattaccgctccaccggcaatatcttaaaagcggctaacacagtcattgataac
aataccggccggttgggcaaagagctttggactgaagacggtcaaggcgagcttatctcg
gtatacgccggctttaatgaattagatgaagcgcgctttattgtctctaaaattaaagac
tggctacatcaaggcaatgcattaaaagataccgctattttataccgtaacaacgcccag
tcgcgggtactcgaagaagccctcttgcacgaaggcatcgcttaccgtatttatggggga
ttacgattcttcgaacgccaagaaattaaagacgcgcttggttatttacgtatgatcaac
cacccgcatgatgacgcggccttcgagcgtgttgtgaatacaccaagtcgtggtattggc
gaaaaaaccttgtctcaagtgcgagaaacggctcgtgcgcacaactgctctatgtggcaa
gccagccaattgctgatcaatgaaaaagcgttaaaagggcgggcgttaaatgccatgcaa
agctttgcgctcttaataagcgagctagaacaggccaccactgaagcgcctctcgaagag
caagctgatgttgctatacgtcaatctggcttgtatgccatgtaccaagcggagcgaggc
gagaaagcgcaagccagattagaaaacttagaagaattagtcacggcgtgtaagcagttt
attgtgcccgaagaagcggaagaaatgacgcccctttccgcctttctcgcccacgcgtca
cttgaagccggcgaacaacaagccgataaagatcaagacgcagtccaaatgatgacgata
catactgcaaagggcttagagtttcctcttgttttcatggccggtgtagaagaggggatg
tttcccagccaaatgaccaacgacgaacccggcagaatggaagaagagcgtcgcctctgt
tatgtgggcatgacacgggctatgcaaaagttatatattacctatgcagaaagtcgccgc
ttgtatggccaagataaatatcatacggcgtctcgctttattaaggaaatacctgcagac
tgtgtagaagaagttcgcttacgcaccactatttcgcggcccgttcacaatcgatttagc
caagcaacgtcacatgcctcctttgaagataccgggtttcaactgggtcagcgggttgtg
cataggaagtttggcgaaggtattgtattaaattacgaaggcagcggcgagcacgcacgc
gtacaagtaaattttgatgaatttggtaccaaatggttggtgctagcatacgctaagttg
gagcaagcgtaa
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