Alteromonas australica DE170: EP12_03925 Help Entry EP12_03925        CDS       T03858                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism aaus  Alteromonas australica DE170 Pathway aaus02020   Two-component system aaus02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:aaus00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     EP12_03925  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     EP12_03925  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:aaus03021]     EP12_03925 Transcription machinery [BR:aaus03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      EP12_03925 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID LTN1_E3_ligase_6th Motif Other DBs NCBI-ProteinID:  AJP42975 LinkDB All DBs Position complement(876924..878408) Genome browser AA seq 494 aa AA seqDB search MKPSLQLKFSQQLTMTPQLQQAIKLLQLSTLDLQQEIQEALDSNPLLEVEEGSDEPQLEK NNIDGDDVAQDAVTTASSDTLEAGDALEKNDLPDELPIDSTWDEYYSASSAPAPGPSNND DEQIFQGETTEDIQAHLLWQMRLTHFSDTDRAIATAIIDSIDESGYLTVTLEDILDSVNS EDMEEPVELDEVECVLKRIQMFDPIGSGSRTPQECLMVQLRQFSDDTPWLKEAKQLIEEY SDLLSSKDYRTLMRKSRLKEDQLREAMRLLQTLNPRPGSALITKEPEYVIPDVSVTKKNG RWVVELNPDSLPKLSVNQQYAAMSRRAKNSSDSQFIRSHMQEAKWFIKSLESRNDTLMKV ANCIVQQQMGFFEHGPEMMKPMVLNDVAEMVDMHESTISRVTTQKYMHTPRGIFELKYFF SSHVATESGGECSSTAIRALIKKLVAAETPSKPLSDSKIAQLLAEQGIKVARRTIAKYRE SLSIPPSNQRKSLL NT seq 1485 nt NT seq  +upstreamnt  +downstreamnt atgaaaccatctttacagttaaagttcagtcaacaacttaccatgacacctcagctacag caggcgataaaactgctgcagctgtcaacgctcgacctgcaacaggagatccaggaagcc ctagactcaaatcctctacttgaagtagaagaaggcagtgatgagcctcaattagagaaa aacaatatcgacggggatgacgtcgctcaagacgccgttactaccgcatcaagcgatacg cttgaagccggtgacgcattagagaagaatgacctacctgatgaattacccatagacagc acgtgggacgaatattactcagcgtcttctgcacccgcccctgggccctcgaataatgac gatgagcagattttccaaggcgaaaccaccgaagacattcaagcacatttgctatggcaa atgcgtcttacccacttttcagatactgaccgtgccatcgcaacggctattatcgattca attgacgagtctggttatcttaccgtcacccttgaggacattttagattctgtaaattcc gaagatatggaagagccggttgaattggacgaagtagaatgtgtgttaaaacgcattcaa atgttcgaccccattggttcaggctcgcgtacaccgcaagaatgcttgatggttcagctt cgccaattttcagatgatacgccttggttaaaagaagccaaacaactgatagaagaatac tcagacctactcagtagcaaagactatcgtacgctgatgcgtaaaagccgtcttaaagaa gatcaattacgcgaagccatgcgcttgttgcaaacattgaatcctcgcccaggtagcgct cttatcactaaagagcctgagtatgttatacccgatgtctcggtcaccaagaaaaatggt cgttgggtggttgaacttaatccagatagcttgcctaaacttagtgtgaaccagcaatat gcggccatgagcagaagagcgaaaaatagtagcgactcgcagttcattcgctctcatatg caggaagcaaaatggtttattaaaagtcttgaatcaagaaacgacaccttgatgaaggtt gcaaattgtattgtgcagcaacaaatgggcttttttgaacatggccctgaaatgatgaag cccatggtgcttaacgatgttgctgaaatggttgatatgcatgaatccaccatttcacgt gtcaccacgcaaaagtatatgcataccccacgtgggatatttgaattgaagtacttcttt tctagtcacgttgccacggagtctgggggtgagtgttcatctactgccatccgcgcgctg attaaaaagcttgtagcggctgaaacgccaagcaagccactaagtgatagcaagattgct caattgttggccgaacagggcattaaagtcgcccggcggacaatagcaaaataccgggaa tcattgtcgattccaccgtctaaccagcgaaagagcttactttaa

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