Alteromonas australica DE170: EP12_05265
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Entry
EP12_05265 CDS
T03858
Name
(GenBank) Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
aaus
Alteromonas australica DE170
Pathway
aaus02020
Two-component system
aaus02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aaus00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EP12_05265
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EP12_05265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aaus03000
]
EP12_05265
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
aaus02035
]
EP12_05265
Transcription factors [BR:
aaus03000
]
Prokaryotic type
Helix-turn-helix
Other families
EP12_05265
Bacterial motility proteins [BR:
aaus02035
]
Flagellar system
Flagellar assembly proteins
Others
EP12_05265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
AAA_16
Mg_chelatase
AAA
AAA_7
bpMoxR
AAA_19
Ribophorin_II
Motif
Other DBs
NCBI-ProteinID:
AJP43201
UniProt:
A0A075NTZ8
LinkDB
All DBs
Position
1153514..1154968
Genome browser
AA seq
484 aa
AA seq
DB search
MKDILLVSDNQELIHSLETIVTFLGESCQSRGFHECEDYLQDSGADAVLIDYTLPSAVKA
LIARFPHIPFVVLQKQNGETTAECNLVSVVTLPLTYPVLTQAIHRCQEYSRRKPGNTRSG
GAKTRLFRSLVGQSDQIQIVRRLVEQVAPTEATVLILGESGTGKEVVARNVHFLSERKDG
PFIPVNCGAIPGELLESELFGHEKGAFTGAISARKGRFELAENGTLFLDEIGDMPLQMQV
KLLRVLQERMFERVGGSKPLKCNVRIIAATHRNLETMIKEDKFREDLYYRLNVFPIDSPA
LRQRKDDIPLLLQELNSRIQGDGVEGVHFTERAIASLMEHDWAGNVRELSNLVERLSILY
PSQVVDVADLPDKYQYGDVQAYEPDYPEELLERDAFNALFAEAAAQEVEEDLDEDDSGLL
MRSSLPEEGVNLKEYLSELEINLIRQALEQQDWVVARAADKLGMRRTTLVEKMRKYDIQR
VEEV
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatattctgctggttagcgataaccaggaactaattcatagtttagaaaccata
gtgacgtttctaggtgagtcgtgtcagtcgcgaggctttcatgaatgcgaagattatttg
caagacagtggcgcagatgctgtcttgattgattacacattgccatctgcggtaaaagcg
cttattgcgcgcttcccacatattccttttgttgtgcttcaaaaacaaaatggcgagaca
actgctgagtgtaatttggtaagtgtagtgacgcttccgcttacctatcctgtcttaacg
caagccattcatcgttgccaagaatattcacgccgaaagccggggaatacacggtcgggt
ggagcaaaaactcgcttgtttcgaagccttgtgggtcaaagcgatcagatacaaattgtt
cgacggttagtcgagcaagtagcgcccactgaagccactgttttgatcctcggggaatcg
gggaccggtaaagaggtcgtggcgcgtaacgttcactttttgtctgaacgaaaagatggg
ccattcattcctgtaaattgtggcgcaattccaggcgaattgctggaaagcgaacttttc
ggtcatgaaaaaggggcgtttactggcgccatcagtgctcgaaagggccgctttgagctt
gcggaaaatggcacgctgtttcttgatgagattggcgatatgccgttgcaaatgcaggta
aagttacttcgggtgcttcaagaaagaatgttcgagcgagtgggtggcagcaaaccctta
aagtgtaatgttcgtattatcgccgccacccaccgaaacttagaaaccatgataaaggaa
gataagtttcgagaagacttgtattacaggctgaacgtctttcccatagacagtccggca
ctgcgtcaacgaaaagacgatatcccgctactcctgcaagaacttaatagtcgtattcaa
ggcgacggtgtcgaaggcgtacactttacagaacgagcgattgcatccctgatggaacac
gattgggccgggaacgttagagagctttcaaacctggtggagcgcctcagtattctttat
ccctctcaagtggttgatgtggctgatttacccgataaatatcaatacggcgatgttcaa
gcttacgaacctgattacccagaagaattgcttgaaagagacgcattcaatgcattattt
gccgaggcggccgcacaggaagtagaagaagaccttgatgaagatgacagtggcttattg
atgcgctcttcactgcccgaagagggggtgaatttgaaagagtatttatctgagttagaa
attaacttaattcgacaagcattggagcaacaagattgggttgttgccagggcggctgac
aagttgggtatgcgaagaaccaccttggttgaaaagatgcgaaagtacgatattcaacgt
gtggaggaagtctaa
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