Alteromonas australica DE170: EP12_06180
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Entry
EP12_06180 CDS
T03858
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
aaus
Alteromonas australica DE170
Pathway
aaus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aaus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EP12_06180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaus03400
]
EP12_06180
DNA repair and recombination proteins [BR:
aaus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EP12_06180
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EP12_06180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_30
EcpC_N
Kinesin
CENP-O
Microtub_bd
DUF8810
Motif
Other DBs
NCBI-ProteinID:
AJP43333
LinkDB
All DBs
Position
1345017..1347032
Genome browser
AA seq
671 aa
AA seq
DB search
MSKGFELHSNYKPAGDQPNAIATLVDGLESGLAAQTLLGVTGSGKTFTMANVISEVQRPT
LILAHNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDHIE
QMRLSATKALMERRDVVIVASVSAIYGLGDPESYMKMLLHLRQGDTMDQRDILRRLAELQ
YKRNDLAFERGTFRVRGDVIDIFPADAEKQAVRVELFDDEIDKISLFDPLTGAVDKSVIR
ATVFPKTHYVTPREKILDAIERIKGELKERKTQLQQANKLLEEQRISQRTQFDIEMMMEL
GYCSGIENYSRYLSGRAPGEPPPTLLDYFPADGLMFIDESHVTVSQVGAMYKGDRSRKET
LVEFGFRLPSALDNRPLKFDEFEQICPQTIYVSATPGEYELNKTQGDIVEQVVRPTGLLD
PEIEVRPVATQVDDVLSEIQKRVKVDERVLITTLTKRMAEDLSEYLNEHGVKVRYLHSDI
DTVERIEIIRDLRIGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRAERSLIQTIG
RAARHINGRAILYADSITKSMRKAMDETGRRRQKQIEHNTANNITPMRLNKPITDIMDLG
EGAHPASGKVRLRKVEEKKKQQKAASATDLMDQIAELEKQMFNYARELEFEKAASLRDDI
EALRKQVVALS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaggatttgaacttcattcaaattacaagccagcaggcgatcaacccaacgct
atagctacccttgtggatgggctagagagtgggttagccgcgcaaaccctattgggcgtt
actggctcaggaaaaacctttactatggcaaacgtgattagtgaagtgcaacgtcctacc
ttaattttggcgcacaataaaacccttgctgcgcaattgtatggcgaaatgaaagagttc
ttccctaacaatgcggtagagtactttgtttcttattacgattattatcagccggaagcc
tacgttcctagtacagataccttcattgagaaagatgcctcaattaacgaccacattgag
caaatgcgattatctgcgactaaggcgctgatggagcgccgggatgtcgtaattgtggca
agtgtgtctgcaatatatggtttgggcgaccctgaatcctatatgaaaatgctgctccat
ttgcgccaaggcgacaccatggatcaacgggacatattacgtcgtcttgctgaattacaa
tataaacgcaacgatttagcttttgagcgaggcacatttcgcgtgcgtggcgatgttata
gatatttttcccgccgatgcagaaaagcaagcggttcgggttgagctgtttgatgatgaa
atagataaaataagccttttcgacccgcttaccggcgcggtcgataaatcggttatccgg
gcaacggtgtttccgaaaacccactatgttacacctcgagaaaagattctcgatgctatc
gagcgtattaaaggtgagctaaaagaacgtaaaactcagttgcaacaggcaaacaaatta
ctggaagagcaacgtatctctcagcgtacacagtttgatatcgaaatgatgatggagttg
gggtactgctctgggatagaaaactattctcgttacctttctggtcgggcgccaggcgag
ccaccgccaaccttattagattatttcccagcggatggcttaatgtttatagatgaatct
cacgttaccgtatcgcaagtgggagccatgtacaaaggggatagatcccgcaaagaaacc
ttagttgaatttggatttcgtcttccatcagcgttagataatcgcccgcttaaattcgac
gaatttgaacaaatatgccctcaaactatttatgtgtcggcaacgccaggcgaatatgaa
ttgaataaaacgcagggcgatattgtagagcaagttgttcgtcctacgggcttactggat
cctgaaattgaagttcgccctgttgctactcaggttgacgacgtgctttctgagattcaa
aagcgggtgaaagttgatgaaagggtattgattaccacgctgactaagcgaatggcagaa
gatttaagcgaataccttaacgaacacggtgtgaaagtcaggtacttgcactcagacatt
gataccgtggaacgtatcgagattattcgagacttacggattggtaagtttgatgtgctc
gtgggaattaacctgttacgagaaggccttgatatgccagaggtgtctttggttgcaata
ttagatgccgataaagaaggtttcctacgcgcagagcgttcactcattcaaacaatcggt
cgggccgccagacacattaatggccgagccattttgtatgccgattctattactaaatct
atgcgtaaagccatggacgaaaccgggcgtcgtcgtcagaagcaaatcgaacataatacg
gcgaacaacattacccctatgcgtttgaataagcctattaccgatattatggatttaggc
gagggcgctcaccctgcgtctggaaaggtgcggctacgcaaagttgaagagaagaaaaaa
caacaaaaagcggccagtgctaccgaccttatggatcagattgcagagctggaaaagcaa
atgttcaattatgcccgagagcttgaatttgagaaggcggcatccttacgggatgacatt
gaagcgttaagaaaacaagttgtggccctctcttaa
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integrated database retrieval system
