Alteromonas australica DE170: EP12_07490
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Entry
EP12_07490 CDS
T03858
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
aaus
Alteromonas australica DE170
Brite
KEGG Orthology (KO) [BR:
aaus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aaus02000
]
EP12_07490
Transporters [BR:
aaus02000
]
Other transporters
Pores ion channels [TC:
1
]
EP12_07490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_4
Motif
Other DBs
NCBI-ProteinID:
AJP43544
LinkDB
All DBs
Position
1609321..1611639
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AA seq
772 aa
AA seq
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MSLTPHSNRTARLPNTSLTLCAMAVATGLWISPVQAQQADEETTQETSKLERIEVTARKT
VESLQETPVAITSIGAAELGEKGISVLTEVQQFSPNTTLQTSRGTNSTLTAFIRGLGQQD
PLWGYEPGVGIYVDDVYIARPQGAVLDLLDVQRIEVLRGPQGTLYGKNTIGGAVKYVTQE
MTGEMQMNLEATLGSYSQRDVKLTGQFPLIEDTVYLGVGYANLNRDGFGEYLISALPNQD
KENYNKDLWAARVTLEIHPSDQLFFRFGWDKTEDTSNAKGGYRLLPSLLTDAPVPDSKYD
SYTSLPTWNKVELEGYNWLARYQVSDNLELKYIGSHRESYSPTNIDFDNTPLPIFDVPAE
YDDSNDTHEIQANYIGDQLSLVSGLYFYDGESCGNFDAILGVLGVSLGATGLTREVSGCN
NSTSWAAYTQLNYDVTDKLSLSVGARFTDEEKTATVYNGLVFANVYPYSDWVDGYVRPDG
ELVPQVLGADANGDDVLDAPAVESWSRFTPRVGVEYQFDDNMMFFASYSQGFKSGTFNPR
ATTNEPGVEPEVVDSIEVGMKSDLTDALRLNVTLFSYDHKDRQYIGVEGDLTDPTALDQR
LRNAAETAAKGAELELTWVATDNLQFDVAYGYIDFEIKENNAIPPLIGLASTPGNTFNLN
ANYLLETSFGDITFNANYYYRDDYLIFETSDLIQQDAYGMVNLSARWESVSGNWYGGLHV
KNLTDEEYLVGGYDFVTRDEDGNYGPGLGGDTTLIGYYGDPRTVHLTVGYRF
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaaccccacacagcaaccgcacagcgcggttacctaatacttctctcacttta
tgtgccatggcagtggccacagggctatggatttcacctgtgcaggcacaacaagcagat
gaggaaaccacgcaagaaaccagcaagctagagcgcatagaggttaccgcgcgtaaaacc
gtggagtcgctacaagaaacccccgtggctatcacgtcaattggtgctgcggaactggga
gaaaaaggcattagcgtactcaccgaagtacagcagttttcgccaaatacaaccttgcag
acaagccggggtaccaactctactcttactgcatttattcgaggtttagggcagcaagac
ccactttggggttacgagccgggggttggaatttatgtagatgatgtctatatcgcacgg
cctcaaggggcggtactggacttactcgatgtgcagcgaatagaagtattgcgtggtccc
caaggaacactttatgggaaaaataccattggtggcgcagtgaaatacgtcacccaggaa
atgacgggtgaaatgcaaatgaaccttgaggctacgcttggtagctacagtcagcgagat
gtaaagctaacgggtcagtttccgctaatcgaagataccgtgtatctgggcgtggggtat
gcaaatttaaatcgtgatgggtttggcgaatatttaatcagtgcactgcccaatcaggat
aaagaaaactacaataaagatttgtgggccgcgcgggtaacgctagaaattcatccaagc
gatcagctcttctttaggtttggctgggataaaaccgaagacacctcaaacgcaaaaggg
ggttaccgactgctacctagcctgttaaccgatgcgcctgtacccgactcaaaatacgac
tcctacaccagcttgccaacgtggaataaagttgagttggaagggtacaattggttggcg
cggtaccaagtgtctgacaatttagagcttaaatacataggttcacaccgagaaagttac
tctccaactaacatcgattttgataacacccccttacctatatttgatgtgccagccgaa
tatgacgacagtaacgatacccatgaaattcaggcgaactatatcggggatcaactcagt
cttgtttcaggcctctatttctatgacggcgaaagctgcggtaactttgatgctatttta
ggggtgttaggcgtgtcattaggggcaacggggttaacccgcgaggtctccggttgcaac
aactcaacaagttgggccgcctatacgcagctaaattatgatgttaccgataaactgtcg
ctatccgttggcgctagattcactgacgaagaaaaaaccgctaccgtgtataacgggctg
gttttcgccaatgtgtatccttattctgattgggttgacggctatgtgcgcccggatggc
gagttagtgcctcaagtactcggggcagacgccaatggtgacgatgtgcttgatgcccct
gcggttgaaagttggtctcggtttacgcctcgcgtcggcgtggaataccaatttgacgac
aacatgatgttttttgccagttattctcaagggtttaagtcaggtactttcaacccccgg
gcaaccaccaatgaacctggtgtagaacccgaagtggtagacagcatagaagtgggcatg
aaaagcgatctgactgacgcgcttcgcctgaatgttactttgttttcgtacgaccacaaa
gacagacagtacataggggtagaaggggatttgaccgacccgacagcgctagatcagcgc
ttgagaaatgcagctgaaacggcggcaaaaggggccgagttggagttaacctgggtagcc
acagacaaccttcaatttgatgtggcttacggctacattgattttgaaatcaaggaaaac
aacgcgattccccccttaattggtttagccagtacccctggaaatacctttaatttgaat
gcaaattacctgctggagaccagctttggtgatattacatttaatgcaaattattactac
cgcgacgactaccttatttttgaaacaagcgatcttattcagcaagatgcctacggcatg
gttaatttgagtgcccgttgggaaagtgttagtggaaattggtatggcgggctccacgtt
aaaaaccttactgacgaagaatatctggttggcggctacgactttgtcacccgagatgaa
gacggaaactacggcccgggtttaggtggtgataccacgctgataggttactacggcgac
cctcgaaccgttcatctcacggtaggttatcgcttttaa
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