Alteromonas australica DE170: EP12_08530
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Entry
EP12_08530 CDS
T03858
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
aaus
Alteromonas australica DE170
Pathway
aaus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aaus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EP12_08530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaus03400
]
EP12_08530
Enzymes [BR:
aaus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
EP12_08530
DNA repair and recombination proteins [BR:
aaus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EP12_08530
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EP12_08530
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EP12_08530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJP43706
LinkDB
All DBs
Position
complement(1832509..1833936)
Genome browser
AA seq
475 aa
AA seq
DB search
MHEPSFLWYDFETFGTSPQKDMPCQFAAIRTDSDLNIIGKPINIMSAIANDYLPHPDACL
VTGITPQQTLRDGSNEADFAKRIYEEMATPNTCSVGFNSIRFDDEVARFLFYRNFYDPYA
REWRNGNSRWDIIDVARACYALRPEGINWPTKEDGSPSFKLEALTQANNISHENAHDALS
DVYATIALAKLMKNAQPRLFEYAFSLRIKHNVWQQIDLTKPSVLLHISSKLPARQGCCTW
IMPIAKHPTNGNAVIAIDLSKPVDGLLNDTAEEIKANLYRSQESLGQSSRPGLKLIHVNR
SPFVTTAKAMTQENADRLGLDRDTCLENYRRLSQHTDLALKLSKVFEDGEFDDDQDVDHA
LYSGGFLNDEDRRWCEQVLEATPDALAALSDQTQHPRLKSQLFRYRARNFPNTLTFDEMT
KWQRHRQARLTDAQSPASITLEPYMLRLEQLAQVHSDNPEKQAILRALYQYAENL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaaccctcttttctctggtacgattttgaaacgtttggtaccagcccacaaaaa
gacatgccttgccagtttgcggcaattcgcaccgatagcgatctcaacattattggtaaa
cctatcaatatcatgagtgccatcgcgaatgattaccttccccatccagacgcctgtttg
gtcacgggcattactccgcagcaaacccttcgggatggcagtaatgaagccgatttcgct
aagcgcatttacgaggaaatggcgacgcccaacacgtgtagtgtggggtttaacagcatt
aggtttgatgatgaagttgctcgttttctgttttaccgaaacttttatgacccctatgcc
agagagtggcgaaatggcaatagccgctgggacatcatcgatgtcgcgagagcttgctat
gccttgcgacctgagggtataaattggccaaccaaagaagacggctcacccagttttaaa
cttgaagcgttaacccaagccaataacatcagccacgagaatgcccacgacgcacttagt
gacgtgtacgccaccattgcgctggcaaagctgatgaaaaacgcccagccaaggctgttt
gaatatgctttctcattgcgtattaagcataatgtatggcagcaaattgaccttaccaag
ccgtctgttttgcttcatatttcgtccaaactccccgcacgtcagggatgctgcacctgg
ataatgccaattgcaaagcacccgactaacggcaatgcggtgattgctattgatttatca
aaacctgtggatggcctactgaatgacaccgcagaagaaataaaagcaaacctttaccgt
tcacaagagtcgttaggacaatcgtcgcggccaggtttaaagcttattcatgtaaaccgt
tctccttttgtcaccacggcgaaagccatgacacaagagaatgccgatagactcggctta
gacagagacacctgtttagaaaactaccgccgcctctctcagcacaccgacctcgcccta
aaactctcaaaggtgtttgaagacggtgagtttgatgacgatcaagatgttgatcatgct
ttgtacagcggaggctttttaaacgacgaagacagacgttggtgtgagcaggtactagag
gcgacacctgatgccttagcagcactgagtgatcaaactcagcacccaagattgaaaagc
cagctatttaggtatcgggcgagaaatttccctaacaccctaacatttgatgaaatgacc
aagtggcagcgccaccggcaagcgcgcttaaccgatgcccagtcaccggcttcaatcacg
ctagagccttatatgctgcgtttagagcagctggctcaagtacacagtgataacccagaa
aaacaagccatactgcgtgcactttatcaatatgctgaaaacctttga
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