Alteromonas australica DE170: EP12_08885
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Entry
EP12_08885 CDS
T03858
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aaus
Alteromonas australica DE170
Brite
KEGG Orthology (KO) [BR:
aaus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aaus03016
]
EP12_08885
Enzymes [BR:
aaus01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EP12_08885
Transfer RNA biogenesis [BR:
aaus03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EP12_08885
Prokaryotic type
EP12_08885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AJP43757
LinkDB
All DBs
Position
1915808..1916788
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AA seq
326 aa
AA seq
DB search
MARRRKGRSINGIVLLDKPLGGSSNQLLQKVRWLYKAQKAGHTGALDPLASGMLPLCLGE
ATKFSQFLLDAEKTYEVTAKLGVRTTTSDADGEVVEEKPVEVNEAQVNAACLAFLGKSKQ
IPSMFSALKHQGKPLYFYARQGIVIEREPRDIEVYELEVTRLALPYVDMRIKCSKGTYIR
SIVDDLGQNLGCGAYVTRLHRTEVADYPTDKMVSLDTLIETQEALSEGEFEALDAYLIPM
DTAVSRLPYILINDAERARFDNGQSVIGTSVTPLVQGKSYRVYHGEDTQRLFLGVGEAVL
DPKDQGVAKNALYVNPKRRVVYGDEG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaagacgcaaaggccgcagtattaatggcattgtacttttagataagccactc
ggtggttcatcaaatcaactattgcagaaagtacgatggttgtataaagcgcaaaaggct
gggcataccggggcactagatccattggcaagcggtatgcttccgctttgtttaggtgaa
gctacgaaattttctcagtttttgttagatgctgaaaaaacctatgaagtcactgctaag
ttaggggtaagaaccaccacctctgacgcagacggtgaggtggttgaagaaaagcccgtt
gaggtgaatgaggcgcaagtcaacgcggcgtgtttggcctttctcggtaagagtaagcaa
atcccgtctatgttttctgcgctaaagcaccaggggaagccgctgtatttctatgcacgt
caaggtattgttatcgagcgtgaacccagagatatagaagtgtatgagttagaggtgacg
cgccttgccttgccttatgtcgatatgcgtattaagtgtagtaaagggacttatatccgt
tccatcgttgacgacttagggcagaacttaggctgtggcgcctatgtcacccgattacat
cgtacagaagtggccgattatcctacggataaaatggtgtcattagacacactgatagag
acgcaagaagcgttatctgagggagagtttgaagcccttgatgcctatctaattcccatg
gatacggccgtgagtcggttgccatatatcctcattaacgatgctgaacgcgctcgattc
gataacggccaaagtgtcataggaacttccgttacccctcttgttcaagggaagtcttat
cgcgtttatcacggtgaagatacacaaaggctttttttgggcgtgggggaggcggtatta
gaccctaaagaccaaggcgtggcgaaaaacgcgctgtacgtcaaccctaaacgacgcgtg
gtttatggcgacgaaggttag
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