Alteromonas australica DE170: EP12_11160
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Entry
EP12_11160 CDS
T03858
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
aaus
Alteromonas australica DE170
Brite
KEGG Orthology (KO) [BR:
aaus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaus03032
]
EP12_11160 (ihfB)
03036 Chromosome and associated proteins [BR:
aaus03036
]
EP12_11160 (ihfB)
03400 DNA repair and recombination proteins [BR:
aaus03400
]
EP12_11160 (ihfB)
DNA replication proteins [BR:
aaus03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EP12_11160 (ihfB)
Chromosome and associated proteins [BR:
aaus03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EP12_11160 (ihfB)
DNA repair and recombination proteins [BR:
aaus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EP12_11160 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
ParE_toxin
HU-CCDC81_euk_2
Phage_holin_3_6
Motif
Other DBs
NCBI-ProteinID:
AJP44141
UniProt:
A0A075P6Z1
LinkDB
All DBs
Position
complement(2427337..2427624)
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AA seq
95 aa
AA seq
DB search
MTKSELIERLADQARHIQAKELELAIKELLEQMAQTLQKGERIEIRGFGSFSLHYRAPRV
GRNPKTGETVKLDGKYVPHFKPGKELRERVDASIA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaattaattgaacggctcgcagatcaagcgcgtcacattcaagcgaaa
gaactcgaattagcgattaaagaacttctcgaacaaatggcgcaaacccttcaaaagggt
gagcgtattgaaattcgtgggttcggaagtttttcactgcactaccgtgcgcctcgcgta
ggtagaaatccaaaaaccggtgaaacagtaaagttagatggtaaatatgtgccacacttt
aaacctggcaaagagcttcgcgaacgtgttgatgcgtcaatagcttaa
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