Alteromonas australica DE170: EP12_11930
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Entry
EP12_11930 CDS
T03858
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aaus
Alteromonas australica DE170
Pathway
aaus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EP12_11930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaus03400
]
EP12_11930
Enzymes [BR:
aaus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EP12_11930
DNA repair and recombination proteins [BR:
aaus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EP12_11930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
SH3_13
SLFN-g3_helicase
UvrD-helicase
AAA_22
UvrD_C
RecD_N
ResIII
DEAD
AAA_12
nSTAND3
PhoH
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AJP44273
LinkDB
All DBs
Position
complement(2584073..2586058)
Genome browser
AA seq
661 aa
AA seq
DB search
MTKNRRIATDIFNGLYGIEAIDKFIAIEFALTESLDEKENEIWLHLLVALSYMQRNGHSC
LPLNVLAGCTWFSDPGLSDVVEDTDTKTVDEVKVGYRFCALTPLIGVVKKALLAPNISSL
FVYSQGVFYSRRYFEFEQEVAGQLANRTRFVNLEEQALSQVKALWPAMFPTSMHAHQDWQ
QIAVTKSLVQHFSVINGGPGTGKTYTVLRLILALQAMDAGLNIVLAAPTGKAQQRMTESI
LSNIAGLRGKVDDTYLNRVPTTATTLHRLLGIREYTVATKYDQYNPLNLDVLIVDEASMV
DLALMTRIMRALPDHARLYFIGDADQLPAVELGNVLEQLVGHSAHDAPHANLDEAKLGAV
PTPLRQHIVSLCPHLPLLPVDEDAKTWVHTLQAPQRFKGQIAKVATAIQKGEADAALANI
TPGVDELADSTTYVSVLQSGVTMRSEQDISKVQLQRMAKESYATVFAATTVDDALKRLNK
VRWLTPIRNGSMGVEGLNTLIYDAIKHNIVRREGSFYQGQPIMITKNNHPQRLSNGEVGI
IWPDSSGKLYAWFETQEGDLRHIALSRVPQYETVYAMTIHKSQGSEFDNVVLLLPKPESA
KSASLFHRGLVYTGLTRAKKGCLIIADSPTFKDMVINLDTRYSGLANAISEKTMGLSEAS
Q
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaatagacggattgccacggacattttcaatgggctatatggtattgaggcc
atagacaaatttattgcaatagaatttgccttaactgaaagcttagatgaaaaagaaaat
gaaatttggctgcatctgttagttgcgctttcttatatgcagcgcaatggacacagctgt
ttaccgttaaacgtattggcaggttgtacatggtttagtgatcccggtctttctgatgtt
gttgaagacaccgacacaaaaaccgtagacgaggtaaaagtgggttatcgtttttgcgcc
ctcacgcccttaattggtgtggtgaaaaaggcgttgttagcgcccaatatttcctcgctg
tttgtttattctcaaggcgtattttatagccgtcggtattttgaatttgaacaggaagtg
gctgggcaattagcgaatagaacgcgcttcgttaatctggaagagcaagcacttagccaa
gttaaagcattgtggccagcaatgttccctacgagtatgcatgcgcaccaagactggcaa
cagattgcagtaactaaaagcttagttcagcattttagtgtgataaatggagggcctggt
acgggtaaaacctatacggtgcttcgcttaatattagcattgcaagccatggatgcaggg
ctaaatattgtgctcgcagcgcctacaggtaaagcacaacagcggatgacagagtccatt
ctaagcaatattgctggtctacgtggaaaagtagacgatacttacttaaatcgtgtaccc
accacagcgaccaccttacaccgattgttgggcattcgagaatatacggtggcgacgaaa
tacgatcaatacaaccctttaaaccttgatgtattgattgttgatgaagccagtatggtt
gatttagccttgatgacaagaataatgcgggcccttcctgatcacgcgcgactctacttt
attggcgatgctgaccaattgcctgcggttgaactaggaaacgttttagagcaattagtg
gggcattcagcacacgatgcaccgcacgcgaatctagatgaggctaaacttggtgcggtg
cctacgccgctaaggcagcatattgtgtccttatgtccacatctgcctttactcccggtg
gatgaagacgcaaaaacatgggtacacaccttacaagcgccacaacggtttaaagggcaa
atcgcaaaggttgcaacagccattcaaaaaggtgaggctgacgcggcgttagcaaatata
acccctggagtcgatgagttggctgattcgacaacctatgtatcagtattgcagtcgggc
gtgacaatgcgatcagagcaagatatcagtaaggtgcagttgcagcgcatggcgaaagaa
agttatgccaccgtgtttgccgccactaccgttgacgatgcactcaagcggttaaacaag
gtgcgctggttaacgcctatacgcaatggcagcatgggcgtagaggggttaaatacgctg
atatacgacgccattaaacataacattgtccgtcgggaaggaagcttttatcaagggcaa
cctattatgatcactaaaaataatcacccgcaacggttatctaatggcgaagtgggcatt
atctggccagattctagcggcaaactctacgcttggtttgaaacgcaagagggtgatttg
cggcatattgccctttcacgggtacctcaatatgaaaccgtatatgccatgacaattcat
aagtcacagggttctgagtttgacaatgttgtattgcttttgcctaagcctgaaagtgcc
aaatctgcgagtttgtttcaccggggattagtttacaccgggctcacccgtgccaaaaaa
gggtgtttaatcattgctgatagccccacatttaaagacatggtgataaacctagatacc
cgttattcaggccttgcaaatgctatcagtgagaagaccatgggcttatccgaggcttca
caataa
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