Alteromonas australica DE170: EP12_12810
Help
Entry
EP12_12810 CDS
T03858
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aaus
Alteromonas australica DE170
Brite
KEGG Orthology (KO) [BR:
aaus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aaus03016
]
EP12_12810
Enzymes [BR:
aaus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EP12_12810
Transfer RNA biogenesis [BR:
aaus03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EP12_12810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AJP44402
UniProt:
A0A350P2N0
LinkDB
All DBs
Position
complement(2789927..2791087)
Genome browser
AA seq
386 aa
AA seq
DB search
MQYQLITTFEQLENVCAIAQTQPAIALDTEFVRTRTLSPHLGLIQLFDGEQLVLIDPIEI
EDLSPFVALMENENVVKVLHSCSEDLETFLSAFDTIPTPVFDTQFAASVLGLGATLGYAK
LVELLCEVSLDKGESRTDWLARPLREAQLSYAANDVLYLLPCYQQLVEKINQAGKLHWVY
QEVELLGQKKRSQMPEDFAYLQIKNNWRLNSEQLTVLQSLAAWRLARAREKDMALNFVFK
ELHLFEAAQLMPTSKAGLSRMHGLSPQSVRRYGETIIALVEEARERYKATPDSLKLPVVK
RLIDVPHYKKMLASLKDISERIAKDNEVTTEVIASKKQLNQLLKWYWFSTDDTRVLGLKP
EVLSGWRQPLFQPHVEALLGQPPVNP
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatcaactaattactacctttgagcaactagaaaacgtttgtgcaatagcgcaa
actcaacctgctattgcccttgataccgagtttgttcgtacgcgcaccttgtcaccgcac
ttaggcctcattcagttgtttgatggcgaacaactggtgcttatcgatcccatcgaaatt
gaagatctttctccttttgtggcactaatggaaaacgaaaatgtggtgaaagtactgcat
tcttgttctgaagatttagaaaccttcttatcagcgtttgataccataccaacccctgtt
tttgatacacagttcgctgctagtgtccttggcttaggtgccacgcttggctatgccaaa
ctggttgaattgctgtgtgaagttagtttagacaaaggtgagtcgcgcacagactggtta
gcaaggcctctgcgagaagcgcaattgagttacgctgctaacgatgttctttaccttttg
ccttgctatcaacaactcgttgaaaaaataaatcaggcaggtaagttacattgggtatat
caggaagttgaattactggggcagaaaaagcgtagccaaatgccagaagattttgcttat
ctccaaattaagaataactggcgtttaaacagcgaacagctcactgtcttgcaatctctc
gcggcgtggcgacttgctcgcgcacgagaaaaagacatggcgttaaattttgtgtttaaa
gaactgcacctttttgaagccgcgcagttaatgccaaccagtaaagcgggcctatcacgc
atgcatggcttaagccctcaaagtgtaaggcggtatggtgaaacaattatcgccttggtt
gaggaagccagagagcgttacaaggcaacgcctgattctttaaagcttcctgtggttaag
cgcctaatagatgtacctcattacaagaaaatgttagcgtcgttaaaagacataagtgag
cgtatcgctaaggataatgaggttaccaccgaagtcattgcgtctaaaaaacagctaaat
caattgctaaaatggtactggttttccaccgatgacacccgtgtattgggccttaaacct
gaagtattaagtggttggcgacaacctttgttccagcctcacgttgaagcgctgcttggt
caacctcccgttaacccataa
DBGET
integrated database retrieval system
