Alteromonas australica DE170: EP12_17255
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Entry
EP12_17255 CDS
T03858
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
aaus
Alteromonas australica DE170
Brite
KEGG Orthology (KO) [BR:
aaus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aaus03000
]
EP12_17255
Transcription factors [BR:
aaus03000
]
Prokaryotic type
Helix-turn-helix
LysR family
EP12_17255
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AJP45121
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Position
3835606..3836499
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AA seq
297 aa
AA seq
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MHHLNYHHLYYFFLVAREGSIAKAASLLHVTPQTVSGQLSTFENQLGYCLFDRVNKRLHL
NTKGKVVFQHASEIFNKGNQLAEILNSHEDVSSKEFVIGITNGIPKVLFYDFVHHTMREH
ANVKYIIKEDSFDGLLKELAINAIDFIVADRGIAPGTQINASSFFLGESAMSFFAKHPLH
PHQHFPQCLNEMPLLMQGHTSGIRHALTSWLETEQLYPKIVAEFDDTALLKLFGSEDFGV
FCAPSAIAEHVEAQYDVHCIGNAPSLNERYYAITGKSRADYTISKAMVEKARQILNV
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacttaaattaccatcacctttattacttttttcttgttgcacgagaaggaagt
atagccaaagcggcttcactacttcacgttacgccacaaacggtgagtgggcaactgtct
acgtttgaaaatcaacttggctactgtttatttgatcgcgtaaataagcggttacaccta
aacacgaaagggaaagtggtgtttcagcatgccagtgagatattcaataaaggcaatcaa
ctggcggaaatattaaacagccatgaggacgtgagttcaaaagagtttgtgataggcatc
actaacggcattcccaaagtgctcttctacgactttgtgcatcacaccatgcgagaacac
gccaatgttaaatacattattaaggaagatagcttcgacggtttacttaaagagttagca
ataaatgccattgatttcattgtggccgaccgagggattgcacccggaacccaaattaat
gccagcagtttctttttaggcgaaagcgcgatgagcttttttgcgaaacacccacttcac
ccacaccagcactttccccaatgtttaaacgagatgcctcttctcatgcaaggccatacg
tcaggtattcggcatgcgctgactagctggcttgagaccgaacagctctatcctaaaata
gtggctgaatttgacgatacggcgttgttaaagctttttggaagtgaagattttggtgtg
ttttgcgcgccttctgccatagcagaacatgttgaggcgcaatatgatgtgcattgtatt
ggtaacgccccgtcgttaaacgaacgttattacgctattaccggaaaaagccgcgccgat
tacaccataagtaaagccatggtggaaaaagcacggcaaattttgaatgtataa
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