Alteromonas australica DE170: EP12_17785
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Entry
EP12_17785 CDS
T03858
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
aaus
Alteromonas australica DE170
Brite
KEGG Orthology (KO) [BR:
aaus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaus03021
]
EP12_17785
Transcription machinery [BR:
aaus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EP12_17785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
HTH_25
HTH_11
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AJP45208
UniProt:
A0A075PA82
LinkDB
All DBs
Position
complement(3950243..3951097)
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AA seq
284 aa
AA seq
DB search
MSNNLQSMALSVPHNGSIEGYIQAVSSIDMLSAEEERELAVRLREDEDLQAARKLVMSHL
RFVVHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPTVGVRLVSFAVHWIKAEIHEFVL
KNWRIVKVATTKAQRKLFFNLRKAKKRLGWFTHEEVQTVANELGVSTKEVLQMEARMSSQ
DQAFDLSADEDETGNFAPVQFLEDKSSDVETDVINSDWDANASKRLYSAIKTLDERSQDI
IETRWLADSKITLQDLADKYEVSAERVRQIEKNAMKKLQAAMVA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaacttacaatcaatggcactgtcagtgcctcacaatggtagcatcgaaggc
tacattcaagctgtgagcagcattgatatgttaagtgcggaagaagagcgtgagctcgct
gtccgtcttcgcgaagatgaagatctccaagctgcacgtaagctggtgatgtcgcatctg
cgttttgttgtgcatattgcaaagtcttattctggttatggcttgccacaagccgacttg
attcaagaaggtaatattggcttgatgaaagccgtgaagcgtttcgaccctactgtgggt
gtacgcctagtgtcttttgcggtgcactggattaaagccgaaattcatgagtttgtgctt
aaaaactggcgtattgtgaaagtcgccaccacaaaagcacaaagaaagcttttctttaac
ctacgtaaagcgaaaaagcgtttgggttggtttacgcatgaagaagtgcaaactgtggct
aatgagctcggtgtgagtacaaaagaagtgcttcaaatggaagcgcgaatgagcagccaa
gatcaagctttcgatttgtctgctgatgaagatgaaaccggcaattttgcacctgtacag
tttctagaggataaatcgtcagatgttgaaactgatgttatcaacagtgactgggatgcc
aacgcaagtaagcgtctttactctgcgatcaaaaccctcgacgagcgtagtcaggacatt
attgaaacccgttggttggcagacagtaaaattactttgcaagatttggcagataaatat
gaagtgtctgcagagcgtgttcgtcaaatagaaaagaacgcgatgaaaaaacttcaagct
gctatggtggcgtaa
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