KEGG   Alteromonas australica DE170: EP12_18210
Entry
EP12_18210        CDS       T03858                                 
Name
(GenBank) helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
aaus  Alteromonas australica DE170
Brite
KEGG Orthology (KO) [BR:aaus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aaus03400]
    EP12_18210
Enzymes [BR:aaus01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EP12_18210
    5.6.2.6  RNA 3'-5' helicase
     EP12_18210
DNA repair and recombination proteins [BR:aaus03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    EP12_18210
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 SNF2-rel_dom AAA_22 AAA_30
Other DBs
NCBI-ProteinID: AJP45267
LinkDB
Position
complement(4038316..4040769)
AA seq 817 aa
MTAKRPTIPDVFTHWFSSKAWRLRPYQKQMLVNKDKYKVTLLIAPTGAGKTLSGFLPSLV
ELTENQHKGLHTLYISPLKALTQDIHRNLLQPIEEMALPITAETRTGDTPSHKRQRQRRK
PPHILLTTPESLMLMLSYADADTLFGKLKRVIIDEAHSLNTNKRGDFLSLALARLNTLSP
DLQRIGLSATVAYPQTLGAWLAGSENTAHVIKVKAGKKPKIKIVKSKARIPFGGFMARYA
IDDIYHAIAQARTALVFVNTRAQAEMLFQHLWEANTQALPIALYHGSLSKEQRRKTESLM
ATGELRAVVCTSALELGIDWGDVDKVIQVGAPKGVSRLLQRIGRANHRLDDPSDALLVPA
NRFEALECQAAITAIKKGQLDGESPQPGAMDIIPQFILNCLCSYPSTPEALYKEILNATP
YQGLDKDDFNKLWQFTLDGGSALNAYERYQRLTKNNDGTYSPANKRVIQRHRQNIGTIVE
AGRLKVKRIRRGNQGKVIGEVEEYFAQQLVPGDTFYFAGEVLKFEAIRDMQLHAKPAKAK
EAKIPSYAGGQMPLSTFLADGVRDILANPSMWRNLPAQVKEWLGLQQAFSTLPSPGQLLV
EQFPFRQTHYTLFYTFDGRKANQTLGMLITRRMEKMSIKPLSFSVTDYGLSISAVNRISE
AQLTTLFQPDILGDELEDWMLQAPMLKRSFRQVAVVSGLTEQRYHAAQKTMKQVTFSTDL
IYDTLREHDPDHILLTVARADAERELLDIKRLANLLIRYVGKTTLVNLEKVSPMAIPIVL
DVRSEQIKGAGAHAMLEQANLYAEAESMLDEVRALLS
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgacagccaagcggccaacaattcctgacgtttttacacattggttttcgagtaaggca
tggcgtttgcgaccttatcaaaagcaaatgttagtgaataaagataagtacaaggtgacg
ttactaatagcgcctacgggcgctgggaaaaccctatcggggtttttacctagcttagtc
gagctaactgaaaatcagcataagggcctacatacactttatatctcaccgctaaaagca
ctgactcaagatattcacagaaacttgctgcagcccattgaagaaatggcgttgccgatt
actgccgaaacccgtaccggagataccccctctcataaacggcaaaggcagcgacgaaag
ccgccgcacattttgctcactaccccagagtcgcttatgctgatgctaagttatgcggat
gcagacaccttatttggcaagcttaagcgggtgatcatcgatgaagcgcacagcttaaat
acgaacaaacgaggcgactttttatcgctagccttagcgcggctaaatacgttgtcgccc
gaccttcaacggatagggttatcagccaccgtggcttacccccaaacgttaggtgcttgg
ttggccggtagtgaaaatacggctcacgttataaaagtgaaagcgggtaaaaagccaaag
ataaaaatagtgaaatccaaggctaggataccgtttggcggatttatggcgcgctatgct
attgacgatatttaccacgctatcgctcaagcacgcactgctttagtgtttgtcaatacg
cgagcacaagctgagatgctattccaacatttatgggaagccaatacacaggcgctgccc
attgcgctttaccatggctctttgagtaaagagcaaaggcgaaaaacggaatctttgatg
gctactggtgaactacgagctgtagtgtgtacgtcagcacttgagcttgggatcgactgg
ggggatgtggataaagtcattcaagttggcgcgcctaaaggggtaagccgtttactccag
cgaataggccgagccaaccatagattggatgatccgagtgatgcgcttcttgtgccagca
aataggtttgaggcgctagagtgccaggcggcgattaccgcgataaaaaaagggcagcta
gatggtgagtctccccaacccggggcgatggatattatccctcagttcatactgaattgt
ttgtgtagttaccctagtacacctgaagcgctgtataaagaaatactaaacgctacgccc
tatcaagggttggacaaagacgactttaacaaattgtggcaattcacccttgatggcggt
agcgccttaaatgcctatgaacgataccaacggctgactaaaaataacgatggcacctat
tcgcccgcgaacaagcgagtgattcagcggcaccggcaaaatataggtaccatagtcgaa
gcaggaagattaaaagtaaagcgcattcggcggggcaatcaaggtaaagttatcggcgaa
gttgaagagtatttcgcgcaacagttagtgccaggagataccttttactttgcgggggaa
gtacttaaatttgaggctatccgcgacatgcaattacatgcaaaaccggcgaaggcgaaa
gaagcaaaaataccgagttatgccggagggcaaatgcccttatctacgttcttagccgac
ggcgtaagggatattcttgctaacccttccatgtggcgtaatttacccgcgcaagtgaaa
gagtggttaggcttgcaacaagctttctcaaccttaccgtctccagggcaactgttggtt
gaacaatttccatttagacaaacccattacacgcttttttatacctttgacggcagaaag
gccaaccaaaccttaggcatgttaattactcggcgtatggaaaagatgagcattaagccg
ctgagttttagtgtgacagactatgggctgtcgattagcgcggtaaatcgtattagtgag
gcgcagcttaccaccttatttcaaccggatattctaggcgatgagttagaagactggatg
ttacaggcgccaatgctgaagcgttcattcaggcaggtggctgtggtgagtggattaacg
gagcagcgctaccatgcggcgcaaaaaaccatgaagcaagtcactttctcaaccgattta
atttacgatacgctgagagagcacgaccccgaccatatcttattaaccgtagcccgagca
gatgctgagcgtgagctgctggacataaagcgcttagcgaatttgcttattcggtatgta
ggcaaaaccacattggtcaaccttgaaaaggtgtctcctatggccattcctattgtttta
gatgtaagaagtgagcaaataaagggggctggcgcccacgccatgctagaacaagctaac
ttgtatgccgaagcggaaagtatgctggatgaagtacgggcgcttttgtcataa

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