Alteromonas australica DE170: EP12_18835
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Entry
EP12_18835 CDS
T03858
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
aaus
Alteromonas australica DE170
Brite
KEGG Orthology (KO) [BR:
aaus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aaus02000
]
EP12_18835
Transporters [BR:
aaus02000
]
Other transporters
Pores ion channels [TC:
1
]
EP12_18835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Opacity
Motif
Other DBs
NCBI-ProteinID:
AJP45346
LinkDB
All DBs
Position
complement(4171474..4173564)
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AA seq
696 aa
AA seq
DB search
MVTRVCGHLRHTLLVVGVLAFTGMAVSVSAQEVENIERIVTTGSRIVSDNQNAAYPITSI
SQQQIEQLSPQHIQQALNYVAGAGVQRGNGQEYLPALRSPVLTGAGACGGILAAEDGIPL
RAAGFCNINELFEAHSEMAQRIDVVKGPSSLLYGSNAIHGVINVVTPDTTQGGGWLGADY
GSYGYARIKVRNGKDFGDSGIGVNASITDDSGYRNGEGVKQEKVNVRYRTALEKGTLTSG
LTYTHLDQDTAGYITGFESYEDPLLIKTNPNPEAFRKAQSFRGWVKLDVQVNQQLALSIT
PYVRHQDMDFRMHFLPGTPLEENDQKGAGLLSQLRYQLTPNLYLNSGVDTEYTRGGLVQS
QDTQTEGSDFLVETVPVGKHYDYDVTAFMLAPFAALEWQTAKWNVSLGGRYERLAYDYTN
NMIDGRTRDDGTECGFGGCRYSRPESGENNFTEFSPKFTLSYSPQDNLQWYLDVAKGYRA
PQATELYRLQRDQEVADLDSVSAVSAQVGLRTGFNNGSLDIAVYRLRKENVIYRDSDFFN
VNNGKTLHKGVEVTLSYQLLPQWAIDVAGTYARHTYEHSQQVGEVDIQGNDMDTAPELQF
NARTHYQINPDTALQLEWQHVGRYFTDPENAHSYEGHDLLHVRGEHQLNNGVTLAVTINN
ILDTAYAERADYTTFTGDRYFPGRPRHYMVSANYTF
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaagagtttgcggtcatctacgccacacgttattagtagtaggcgtacttgcc
tttacaggtatggcggtgagtgtttctgcacaagaggtagaaaacattgaacgtattgtt
accacggggtcacgcatagtaagtgataatcaaaatgccgcctatccgatcacttcgatt
tcccagcagcaaatagaacaactctcgccacaacatatacaacaagcgctaaattatgtg
gcgggtgcgggcgtgcagcgagggaatggtcaagaatatttacccgctttgcgatcgcca
gttttaacgggggcgggtgcctgtggggggatacttgcagcagaggatggtattccatta
cgcgcagcggggttttgtaatattaacgagctgtttgaagcgcatagcgaaatggcgcag
cgcatagacgtggttaaggggccaagctctctattgtacggctcaaatgctatccatggt
gtcataaatgtagtcacgccggataccacgcaaggaggtggctggctaggcgccgactat
ggttcatatggatacgctagaataaaagtgcgcaatggcaaggatttcggtgatagtggc
ataggagtgaatgccagtattacagatgacagcgggtatagaaatggcgaaggcgtgaaa
caggaaaaggtgaatgtacgatacagaaccgcccttgagaagggaacgttgacgtcgggg
cttacatacacccatttagaccaggacaccgcgggctatattaccggttttgaaagctat
gaagatccgcttttaatcaaaaccaacccgaatccagaagccttcagaaaagcccaaagt
tttcgggggtgggttaagttagatgtgcaagtcaaccagcaactggcgttgtctattact
ccttatgtacgtcatcaggatatggattttcgcatgcattttttaccaggaacgccgcta
gaagaaaatgaccaaaaaggcgcaggattgttatctcagctgcgctatcagcttactcct
aacttatacctgaattcaggtgtggataccgaatatacccgaggtggcttagtacaatcg
caagacacccaaacagaaggctcagactttctagtcgaaacggtgccggtaggaaaacac
tacgattacgacgtgacagcgtttatgttggcccctttcgctgcgctagagtggcaaaca
gcaaaatggaatgtgtccctaggtgggcgatacgagcggcttgcctacgattacaccaac
aatatgatagatggacgaaccagagacgatggcactgaatgtggttttggcggctgccgg
tattctcgcccagagagtggtgaaaataacttcacagagtttagccctaaatttaccctg
agttactcgcctcaagacaatcttcaatggtatttagatgtagccaaggggtatcgagcg
ccacaagccactgagttataccgcttgcaacgagatcaagaagtggctgatttagattcg
gtttcagcggtaagtgcgcaagtaggtttacgcacggggtttaacaatggcagccttgat
atcgcggtgtatcgattgcgaaaagaaaacgtcatctatcgagacagtgacttttttaat
gtcaataacggcaaaacgctacataagggcgttgaggttacgctgagctaccaactgcta
ccgcagtgggccatagacgtggcagggacttatgcaagacacacttacgaacattcacag
caagttggagaggtggacattcaaggtaacgatatggataccgcgccggaacttcaattc
aatgcaagaacccattaccaaataaaccccgataccgcgcttcaattggagtggcagcat
gtagggcgttattttaccgatccagagaatgcacacagttatgagggacatgatttactg
catgtgcgtggggagcatcagttaaataatggcgtaaccctcgcggtaaccataaacaat
attctcgataccgcttatgcggaacgggcagattatacgacctttactggcgaccgttat
ttccctgggcgaccccgtcattacatggttagcgcaaattatactttctaa
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