Aceticella autotrophica: ACETAC_09385
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Entry
ACETAC_09385 CDS
T09086
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aaut
Aceticella autotrophica
Pathway
aaut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACETAC_09385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaut03019
]
ACETAC_09385
03009 Ribosome biogenesis [BR:
aaut03009
]
ACETAC_09385
Enzymes [BR:
aaut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACETAC_09385
Messenger RNA biogenesis [BR:
aaut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACETAC_09385
Ribosome biogenesis [BR:
aaut03009
]
Prokaryotic type
rRNA helicases
ACETAC_09385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QSZ27066
UniProt:
A0A975AV85
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All DBs
Position
complement(1928666..1930228)
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AA seq
520 aa
AA seq
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MEERKFNELGLNEDILKAIDDMGFEEPSKIQVEVVPVLLEGYDVIGQAQTGTGKTLAYGA
PILNNMDKTGGKIKGIIVAPTRELAIQVNDELNRIAKYTKVKLLPVYGGQPIERQIKALK
RGVDIVVGTPGRILDLCRRKILDLSGIKYFVLDEADEMLNMGFIEDIEEIIKLLSDERQT
MLFSATMPEKVQRLAKKYMKPDLKHILIAKNTMTVSTVYQYYYEIKQKDRFESLCRILDV
DEPSTAIIFCKTKKGVDELVNSMQARGYNVEGMHGDMSQNQRLNTLKKFREGNLDFLVAT
DVAARGLDVENVSHVINYDLPQDVESYVHRIGRTGRANKEGKAYTLVTSREYVTLKQIEK
ITKSKIKRREVPSIDEVFMSKYQNMVSRVKEILEGEEFKKFIPFVEELDEDYSLVDVAAA
LMNMVYSKEICRDYIDDGEEPKVVRLFLNVGRKDKLNPKELIEFFNNTAEISNEDIGDID
ILDKFSFADVSGDAAKQILKYCPGKRLCGRKVNVEMSNRR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaaagaaaatttaatgaattggggcttaatgaagatatcctaaaggcaattgat
gacatgggatttgaagagccgtcaaaaattcaggttgaagtagtgccggttttattagag
ggatatgatgttattgggcaggcacagacaggtacaggaaaaacacttgcatatggggct
cctattttaaataatatggacaaaacagggggcaagataaaaggtataatagtagcacct
accagggagttggcgatacaggtaaatgatgaattgaatcgtattgcaaaatatactaaa
gtcaaattgcttcctgtttatggcggacagccaatcgaaagacagattaaagccttgaaa
agaggagttgatattgtcgtagggactcccggcaggattttagacctgtgcagaaggaag
atattagatttaagcggtataaaatattttgtgcttgatgaagcagatgaaatgcttaat
atgggtttcattgaagatatagaggagataatcaagcttttaagtgatgaaagacaaaca
atgttgttttcggctacaatgcctgaaaaagtacaaaggcttgcaaagaaatatatgaaa
ccggaccttaaacatatattaattgcaaaaaacaccatgacagtttctaccgtttatcaa
tattattatgaaatcaagcaaaaagatagattcgaatcattatgcaggatattggatgtt
gatgaaccgtcaacagcaataattttttgcaaaacaaaaaaaggtgttgatgaacttgtg
aattcaatgcaggcaaggggatataatgttgaaggaatgcatggcgatatgagtcagaac
caaagattaaacaccttgaaaaaattcagggaaggaaatcttgacttccttgtcgctaca
gatgtcgcagcaagagggcttgatgtagaaaatgtatcacatgtaataaattacgacctt
ccacaggatgttgaatcctatgttcacagaattggaagaacaggaagggctaataaagaa
ggcaaagcatacaccctcgttacctcaagggaatatgtaacactaaaacagatagaaaaa
attactaaaagcaaaataaaaagaagagaagttccctctattgatgaggtatttatgtca
aaatatcagaatatggtttcaagggtaaaggagatattagagggtgaagagtttaaaaaa
tttattcctttcgtagaagaacttgatgaagattacagcttagttgatgttgcggcagca
ttgatgaatatggtttatagcaaggaaatatgccgagactatatagatgatggagaagag
cccaaagtagtaagactttttttgaatgtcggtcgtaaggataaacttaatccaaaagag
cttattgaattctttaataatacagcagaaataagcaatgaggatatcggtgatatagat
atacttgacaaattttcttttgcagatgtcagcggtgatgcagcaaaacaaatattgaaa
tactgcccggggaagaggctttgcggtagaaaagtaaatgtcgagatgtcaaatagaaga
taa
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