Paracidovorax citrulli: Aave_0109
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Entry
Aave_0109 CDS
T00451
Name
(GenBank) transcriptional regulator, TetR family
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
aav
Paracidovorax citrulli
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aav03000
]
Aave_0109
Transcription factors [BR:
aav03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Aave_0109
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_24
HTH_22
TetR_C_13
HTH_23
TetR_C_21
LacI
Motif
Other DBs
NCBI-ProteinID:
ABM30721
LinkDB
All DBs
Position
complement(115561..116184)
Genome browser
AA seq
207 aa
AA seq
DB search
MTAADALPRLTDRKREAIVQAAIAEFRESGFSGTSMDRVAAAAGVSKRTVYNHFPSKDEL
FSAILDQLWNRSHALPDLRHDADRPLRQQLLELIGGKMQLFNDPSFMDLSRVVMAEMLHT
PERAKAMAERLSSREEGLPAWIRDAQEAGRLRADADPLYAAHLLMGQLKTHAFWPQLILG
QPPLDAAQQAQVLADAVDMFLGFYARG
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagccgacgcgctcccccgcctgaccgaccgcaagcgcgaagccatcgtgcag
gcggccatcgcggagttccgcgaaagcggtttctccggcaccagcatggaccgtgtggcc
gccgccgccggtgtatcgaagcgcacggtctacaaccatttccccagcaaggacgagctg
ttctccgccatcctcgaccagctctggaaccgcagccacgcgctgcccgatctgcgccac
gacgccgaccggccgctgcggcagcagttgctggagctgatcggcggcaagatgcagctc
ttcaacgatccgagcttcatggacctctcgcgcgtggtgatggccgagatgctgcacacg
cccgaacgcgccaaggcgatggccgagcgcctttcctccagggaggaaggcctgcccgcc
tggatccgcgacgcgcaggaagcgggccggctgcgcgccgatgccgatccgctttatgcc
gcgcacctgctcatgggccagctcaagacgcatgccttctggccgcaactcatcctgggc
cagccgccgctggacgctgcgcagcaggcccaggtgctggccgacgcggtggacatgttc
ctgggcttttacgcccgcggctga
DBGET
integrated database retrieval system
