Paracidovorax citrulli: Aave_0185
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Entry
Aave_0185 CDS
T00451
Name
(GenBank) helicase c2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
aav
Paracidovorax citrulli
Pathway
aav03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Aave_0185
09124 Replication and repair
03420 Nucleotide excision repair
Aave_0185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aav03021
]
Aave_0185
03036 Chromosome and associated proteins [BR:
aav03036
]
Aave_0185
03400 DNA repair and recombination proteins [BR:
aav03400
]
Aave_0185
Enzymes [BR:
aav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Aave_0185
Transcription machinery [BR:
aav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Aave_0185
Chromosome and associated proteins [BR:
aav03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Aave_0185
DNA repair and recombination proteins [BR:
aav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Aave_0185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ABM30797
UniProt:
A1TIK9
LinkDB
All DBs
Position
207110..209506
Genome browser
AA seq
798 aa
AA seq
DB search
MQTATEPATEPADPGASGADRAQPWGYTIAVRELCEFTAKQGDLDLRFTPAPTAREGMAG
HAAVAARRAAGSPGYEAEVPLEGVCGLLRVRGRADGFDAVAGRVDEVKTFKGRLDRQPAA
HRALHWAQARVYGWLLCASRGLPGLTVSLVYLDIGTQKETVLSEDWTAQALRAHFEALCG
RFVDWAAQEVAHRAARDAALRTLAFPFAGGFRAGQRPLSEAVYRAAAAGRCLLAQAPTGI
GKTVGTLFPLLKAAPGAGIDKVFFLAAKTSGRQVALDALARIVAAPQESHQAPAAPLTLP
LRVLELVAREKSCEYPGSACHGDACPLARGFYDRLPAARADALRPPACGAPAPLDQARVR
DAALRHGVCPYYLGQELGRWADVVVGDYHYYFDMGGLLHGLAQAGQWRVALLVDEAHNLV
ERGRRMYSAELLPESLLQARRSATAATVPAVKKALDRVRRGWMALDREQPADYAVLEAFP
GKLLAALQQCSVALGEHFAEHPEQMDAALQTFHLEVLQLLRMAELLDAHSIVDVSRPAQG
AAPVGSVVCVRNLVPAPFLGPRLQAAQSGTLFSATLQPMDYYADLLGLPQDHARADVASP
FRAAQLQVHVARHISTRYAHRAASVQPIADLMARQFAERPGNYLAFFSSYDYLQQVAQVF
AQRHPGVPHWCQSRRMQEAGQRAFLERFTEDGEGIGFAVLGGAFAEGIDLPGRRLIGAFL
STLGLPQVNPVNEQVRERMDRLFGAGYDYAYLYPGLQKVVQAAGRVIRTPEDEGVVHLID
DRFARAQVRRLLPAWWSI
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcagacggcaacggaaccggccacggagcccgcggaccccggagcgtccggcgcggac
cgcgcgcaaccgtggggctacaccatcgccgtgcgcgagctgtgcgagttcaccgccaag
cagggcgacctcgatctgcgcttcacgccggcgcccacggcgcgggagggcatggcgggc
catgccgcggtggcggcccggcgggcggccgggtcccccggctacgaggccgaggtgccg
ctggaaggcgtgtgcggcctgctgcgcgtgcgcggccgcgccgacggattcgacgccgtg
gcgggtcgcgtggacgaggtcaagaccttcaagggccggctcgaccgccagccggccgcc
caccgcgcgctgcactgggcacaggcccgggtgtacggctggctgctgtgcgcctcgcgc
ggcctgccggggctcactgtctctctggtgtacctggacatcggcacgcagaaggaaacc
gtgctgtccgaagactggacggcgcaggcgctgcgagcgcatttcgaggcgctgtgcggc
cgcttcgtggactgggccgcgcaggaggtggcccaccgcgcggcgcgcgacgccgcgttg
cgcaccctggccttcccgttcgcagggggcttccgcgcaggccagcggcccctgtccgaa
gccgtgtaccgggccgccgccgccggccgctgcctgctcgcgcaggcgcccacgggcatc
ggcaagacggtgggcacgctgttcccgctgctcaaggccgcgccgggcgcgggcatcgac
aaggtcttcttcctcgcggccaagacctccgggcggcaggtcgccctggatgcgctcgcc
cgcatcgtcgcggcaccgcaggagtcgcaccaggcccctgcggcgcccctgaccctgccc
ctgcgcgtgctggaactggtggcgcgcgagaagtcctgcgaatacccgggcagcgcctgc
cacggcgacgcctgcccgctcgcgcgcggcttctacgaccggctgccggccgcgcgggcc
gatgcgctgcgcccgccggcgtgcggggcgccggcaccgctggaccaggcccgcgtgcgc
gatgccgccctgcgccacggggtgtgcccctactacctgggccaggaactcgggcgctgg
gccgacgtggtggtgggcgattaccactactacttcgacatgggcggcctgctgcacggc
ctggcgcaggccggccagtggcgcgtggccctgctggtggacgaagcgcacaaccttgtg
gagcgcggccggcgcatgtacagcgcggaactgctgccggaatcgctcttgcaggcccgc
cgctcggccaccgccgccaccgtgccggccgtgaagaaggccctggaccgcgtgcggcgc
ggctggatggcactggacagggagcagccggccgactacgccgtgctggaggccttcccc
ggcaagctgctcgcggcgctgcagcagtgctctgtcgcgctgggcgagcacttcgccgag
catccggagcagatggacgccgcgctgcagaccttccacctggaagtgctgcagctgctg
cgcatggccgaactgctggacgcgcattccatcgtggacgtgagccgccccgcgcagggc
gcggcccccgtcggttccgtggtctgcgtgcgcaacctggtgcccgcgccgttcctgggg
ccgcgcctgcaggccgcgcagtcgggcacgctgttttccgccacgctgcagcccatggac
tactacgccgacctgctgggcctgccgcaggaccacgcccgcgccgacgtggcctcgccc
ttccgtgcggcgcagctgcaggtgcacgtcgcgcgccacatctccacgcgctatgcccac
cgcgcggcctcggtgcagcccatcgccgacctcatggcgcggcagttcgcggagcggccc
ggcaactacctggccttcttcagcagctacgactacctgcagcaggtggcgcaggtgttc
gcgcagcgccatcccggcgtgccgcactggtgccagtcgcgccgcatgcaggaggccggg
cagcgcgcgttcctggagcgtttcaccgaggatggcgagggcatcggcttcgcggtgctg
ggcggcgccttcgccgagggcatcgacctgcccggccgccggctgatcggggccttcctc
tccaccctggggctgccgcaggtgaacccggtgaacgagcaggtgcgcgaacgcatggac
cggctcttcggggcgggctacgactacgcctatctctacccgggcctgcagaaggtcgtg
caggccgcgggccgggtgatccgcacgccggaggacgagggcgtggtgcacctcatcgac
gaccgcttcgcgcgcgcgcaggtgcggcggctgctgcccgcgtggtggagcatctga
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