Paracidovorax citrulli: Aave_0626
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Entry
Aave_0626 CDS
T00451
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aav
Paracidovorax citrulli
Pathway
aav03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Aave_0626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aav03021
]
Aave_0626
03400 DNA repair and recombination proteins [BR:
aav03400
]
Aave_0626
Enzymes [BR:
aav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Aave_0626
Transcription machinery [BR:
aav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Aave_0626
DNA repair and recombination proteins [BR:
aav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Aave_0626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ABM31230
UniProt:
A1TJU2
LinkDB
All DBs
Position
676973..677965
Genome browser
AA seq
330 aa
AA seq
DB search
MQTNLLKPKTINVEQLGHNRAKVALEPFERGYGHTLGNAIRRVLLSSMVGYAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTARDIQTPHDVEI
VNPDHVIAHLSQGGKLDMQIKVEKGRGYVPGNLRRYADESTKSIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVVEIETNGAITAEDAVRASAKILVEQLAVFAQLEGGELAAFDT
PAGPRGSATFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKS
LNEIKEVLASRGLTLGMKLENWPPAGLDKR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaatttgctgaaacccaagacgatcaacgtcgagcagctcggacacaaccgc
gccaaggtcgcgctggagcccttcgagcgcggatacgggcacacgctcggcaacgccatc
cggcgcgtgctgctgtcgtccatggtgggttacgcagcaacggaagtgacgatcgccggc
gtgctccacgagtactcgtccatcgacggcgttcaggaagatgtcgtgaacatcctgctg
aacctgaagggcgtcgtgttcaagctccacaaccgcgacgaggtcacgctgagcctgcgc
aaggatggcgagggcgtggtcaccgcccgcgacatccagacgccgcacgacgtggaaatc
gtcaatcccgaccacgtgatcgcccacctgtcgcaaggcggcaagctggacatgcagatc
aaggtggagaagggccgcggctacgtgccgggcaacctgcgccgctatgccgacgaatcg
accaagtcgatcggccgcatcgtgctggacgcctccttctcgccggtcaagcgtgtgagc
tacacggtcgagagcgcccgcgtcgagcagcgcaccgacctggacaagctggtcgtcgag
atcgagaccaatggtgcgatcaccgcggaagatgccgtgcgcgcctccgccaagatcctg
gtcgagcagctcgctgtcttcgcacagctcgagggcggtgaactggccgcgttcgacacg
ccggccggcccgcgtggcagcgccacgttcgatccgatcctgctgcgtcccgtggacgag
ctggaactcaccgtgcgctcggccaattgcctgaaggccgagaacatctactacatcggc
gacctgatccagcgtaccgagaacgagctgctcaagaccccgaacctgggtcgcaagtcg
ctcaacgagatcaaggaagtgctggcttcgcgcggcctcacgctgggcatgaagctcgag
aactggccgccggccggcctcgacaagcgctga
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