Paracidovorax citrulli: Aave_0787
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Entry
Aave_0787 CDS
T00451
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
aav
Paracidovorax citrulli
Pathway
aav00061
Fatty acid biosynthesis
aav00071
Fatty acid degradation
aav01100
Metabolic pathways
aav01212
Fatty acid metabolism
aav02024
Quorum sensing
aav04146
Peroxisome
Module
aav_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Aave_0787
00071 Fatty acid degradation
Aave_0787
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Aave_0787
09145 Cellular community - prokaryotes
02024 Quorum sensing
Aave_0787
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
aav01004
]
Aave_0787
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aav04147
]
Aave_0787
Enzymes [BR:
aav01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Aave_0787
Lipid biosynthesis proteins [BR:
aav01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Aave_0787
Exosome [BR:
aav04147
]
Exosomal proteins
Exosomal proteins of breast milk
Aave_0787
Exosomal proteins of breast cancer cells
Aave_0787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
LPD22
Motif
Other DBs
NCBI-ProteinID:
ABM31385
UniProt:
A1TK97
LinkDB
All DBs
Position
complement(845380..847326)
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AA seq
648 aa
AA seq
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MSDTFPRLLLRHAAERPQAAALREKEYGIWQTTTWARLAQLVERLAAGLDAAGLARGEHL
VVIGANRPRLYATMLAAQSLGAIPVPLYQDAVAAECVYPLNNAEVRFCVVEDQEQVDKLL
EIRAQCPAIARIFYDDPRGLRNYAEPGLQSIDALLEDGARTADAAPGWFAARAQAVQPDD
VAAMFFTSGTTGNPKGVVHTHATLLDRATAGAEFDRLTAAEDVLAYLPPAWIGQNIFSYA
QWLACGYVVNCPESAATVSIDLKEIGPTYYFAPPRIFEGLLTSVTIRMEDAGAFKRWLFR
TCMAHARRVGPALQSGQAVGWWDRLRYAAGDLLVYGPLRNTLGFSRVRVAYTAGEAIGPD
LFTFYRSIGINLKQLYGSTETAVFVCLQPDDAVHADTVGVPIRGVEIRVDGNGEILVKSA
GLLRGYYKNPEATAEVLTPDGWYRTSDAGFLDASGQLKIIDRVKDVGRLSGGPHDGAMFA
PKYVENKLKFFPHIKEAVALGNGRDKVCALINIDFEAVGNWAERQNLPYAGYTDLAAKPE
VLALVRDCVEKVNADLAADGLLAGSQVARFLVLHKELDADDGELTRTNKVRRGFIADKYG
VLVDALYAGRTEQFIETQVKFEDGRTGRVSATLRIEDAKTFPPVRQAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacctttccccgactgctgttgcgccacgcggccgagcgcccccaggccgcc
gcgctgcgcgagaaggaatacggcatctggcagaccaccacctgggcgcgcctcgcgcag
ctggtggagcggctggccgcgggcctggacgccgcgggcctggcgcgcggcgagcacctg
gtggtgatcggcgcgaaccggccgcggctctacgccacgatgctcgcggcgcagtcgctg
ggcgccatccccgtgccgctctaccaggacgccgtggcggccgaatgcgtctatccgctg
aacaacgccgaggtgcgcttctgcgtggtggaggaccaggagcaggtggacaagctgctg
gagatccgcgcgcagtgccccgccatcgcccgcatcttctacgacgatccgcgcggactg
cgcaactacgccgagccgggcctgcaatcgatcgacgcgctgctggaagacggcgcgcgc
accgcggatgccgcgccgggctggttcgccgcacgcgcccaggccgtgcagcccgatgac
gtggccgcgatgttcttcacctccggcaccacgggcaaccccaagggcgtggtgcacacg
cacgccacgctgctggaccgcgccacggccggtgccgagttcgaccgactcaccgccgcc
gaggacgtgctggcctacctgccacccgcctggatcgggcagaacatcttcagctatgcg
caatggctggcctgcggctacgtggtgaactgcccggaatcggccgccacggtgtcgatc
gacctgaaggagatcggccccacctactacttcgcgccgccgcgcatcttcgaaggcctg
ctcacgagcgtgacgatccgcatggaagacgcgggcgccttcaagcgctggctgttccgc
acctgcatggcgcatgcgcgccgcgtggggccggcgctgcagagcggccaggcggtgggc
tggtgggaccggctgcgctacgccgcgggcgacctgctggtctatggcccgctgcgcaat
acgctgggcttctcgcgggtgcgcgtggcctacacggcgggcgaagcgatcgggccggac
ctgttcaccttctaccgctccatcggcatcaacctcaagcagctctacggctccaccgag
acggcggtgttcgtgtgcctgcagcccgacgacgcggtgcatgccgacacggtgggcgtg
ccgatccggggcgtggagatcagggtggacggcaacggcgagatcctcgtgaagtccgcg
ggcctgctgcgcggctactacaagaaccccgaggcgacggccgaagtgctcacgccggac
ggctggtaccgcacgagcgacgcgggcttcctggacgcgagcgggcagctcaagatcatc
gaccgcgtgaaggatgtcggcaggctctccggtgggccgcacgacggcgcgatgttcgcg
cccaagtacgtggagaacaagctcaagttcttcccgcacatcaaggaagcggtggcgctc
ggcaacggccgcgacaaggtctgcgcgctgatcaacatcgatttcgaggccgtgggcaac
tgggcggagcgccagaacctgccgtatgcgggctacaccgacctcgcggccaagcccgag
gtgctggcgctggtccgcgactgcgtggagaaggtgaacgccgacctcgcggccgacggc
ctgctcgcgggcagccaggtcgcccgcttcctggtgctgcacaaggagctggatgccgac
gacggcgagctcacgcgcaccaacaaggtccgccgcggcttcatcgccgacaagtacggc
gtgctggtcgatgcgctctacgcgggccgcaccgagcagttcatcgagacgcaggtgaag
ttcgaggacgggcgcacgggccgcgtgagcgccacgctgcgcatcgaggacgcgaagacc
ttcccgcccgtgcggcaggccgcctga
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