Paracidovorax citrulli: Aave_0792
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Entry
Aave_0792 CDS
T00451
Name
(GenBank) RNA-binding S4 domain protein
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
aav
Paracidovorax citrulli
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aav03009
]
Aave_0792
Enzymes [BR:
aav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
Aave_0792
Ribosome biogenesis [BR:
aav03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Aave_0792
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S4
Lipocalin_5
S4_2
Motif
Other DBs
NCBI-ProteinID:
ABM31390
LinkDB
All DBs
Position
complement(853172..853975)
Genome browser
AA seq
267 aa
AA seq
DB search
MHDLSPDGTGAGEAGHIRLSKRVAEMRGCSRREAEWLIEGGWVQVDGRMTEAPGARVRPD
QDVVVAQNAKAEEAPPVTLLLHKPAGWEAGIGHGPAGDPRQARSGGAPDAGTLLEPGRRY
VGDSPPVRVLQRHFRQQECFTPLADAASGLVVYTQDRRMARRLAEDIELLEQECIATVDG
RIAEGGLERLCRGLEFNGRPLPPAKVSWQSETRLRFALKGIRPGQIPAMCEAVGLQVTAL
KRLRIGRVSLARVPEGQWRYLLPWERF
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatctttcccccgatggcaccggcgccggagaagccggccacatccgcctgtcg
aagcgcgtcgccgagatgcgcggctgctcccgccgcgaggccgagtggctcatcgaaggc
ggctgggtgcaggtggacgggcggatgaccgaggcgccgggcgcccgtgtccgcccggac
caggacgtcgtggtcgcgcagaacgccaaggccgaggaggcgccgcccgtcaccctcctg
ctgcacaagcccgccggctgggaggccggcatcggccacggccccgccggcgatccgcgc
caggcgcgcagcggcggggctcccgacgccggcacgctgctggagcccggccgccggtac
gtgggcgacagcccgcccgtgcgggtgctgcagcggcatttcaggcagcaggagtgcttc
acgccgctggccgacgcggccagcgggctcgtggtctatacgcaggaccggcgcatggcg
cgccgcctggccgaagacatcgaactgctcgaacaggaatgcatcgccacggtggacggc
cgcatcgccgagggcggcctcgaacggctctgccgggggctggagttcaacggccggccc
ctgccgccggccaaggtgagctggcagagcgagacgcggctgcgcttcgcgctcaagggc
atccgcccggggcagatccccgcgatgtgcgaggccgtcggcctgcaggtgacggcgctc
aagcggctgcgcatcggccgcgtctcgctcgccagggtgcccgaagggcagtggcgctac
ctgctgccctgggagcgcttctga
DBGET
integrated database retrieval system
