Paracidovorax citrulli: Aave_0906
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Entry
Aave_0906 CDS
T00451
Name
(GenBank) deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
aav
Paracidovorax citrulli
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aav03400
]
Aave_0906
Enzymes [BR:
aav01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Aave_0906
DNA repair and recombination proteins [BR:
aav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Aave_0906
Prokaryotic type
Aave_0906
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABM31504
UniProt:
A1TKL6
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All DBs
Position
complement(988346..989827)
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AA seq
493 aa
AA seq
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MEPTFSKGLVWFRRDLRSDDHAALYHALRQCGQVHCVFVFDTAILDPLPRADRRVEFIRE
SLVQLDASLRALSGHRHGGLIVRHGVAAEEVPALAARLGVQAVFANHDDEPVALERDDRV
RRRLGTGGVQMLTYKDHAIFERAEVLTQGGTPYTVFTPYKNAWLRKVDAFYLSAYPVERH
AGRLAPRPEGERGGVPALADIGFEPAGLDRLPLPPGMDGARALLDDFLQRIDQYGEARDF
PAVKGPSYLSVHLRFGTLSPRRAARAAHERMRQGSTGAATWLNELIWRDFYFQVLAHHPQ
VAGGASFKPAYDAIAWEDGPQARERFAAWCEGRTGYPLVDAAMAQINRTGYMHNRLRMVV
ASFLVKDLGVDWRWGERYFAEKLNDFDLSANNGGWQWASSSGCDAQPYFRIFNPVSQSRK
FDPKGRFIRLYLPQLAALPDRWLHAPWEAGPLELEAAGVRLGDNYPHPVVDHDEARQRTL
ARYAVVKSEAAPA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggagcccactttttccaaaggcctggtctggttccggcgcgacctgcgcagcgacgac
catgccgcgctctaccacgcactgcgccagtgcggccaggtgcattgcgtcttcgttttc
gacacggccatcctggatccgctgccgcgggcggaccggcgcgtggagttcatccgcgaa
tcgctggtgcagctcgacgcgtccctgcgcgccctctcgggccaccgccacggcgggctg
atcgtgcgccacggcgtggccgcggaggaagtgcccgcgctggccgcgcgactgggggtg
caggccgtgttcgccaaccatgacgacgagccggtcgccctggagcgcgacgaccgcgtc
cgccgcaggctgggcacaggcggtgtgcaaatgctcacttacaaggaccacgcgattttc
gaacgcgcggaggtcctgacccagggcggcacgccctacaccgtgttcacgccctacaag
aatgcctggctgcgcaaggtggacgcgttctacctgagcgcctatcccgtggagcgccat
gcgggccggctcgcgccccgtccggaaggagagcgtggcggcgtacccgcgctggccgac
atcggcttcgagcccgcggggctggaccgcctgcccctgccgccgggcatggacggcgcg
cgcgcgctgctggacgattttctccagcggatcgaccagtacggcgaggcacgcgacttt
ccggccgtgaaggggccgagctacctcagcgtgcacctgcgcttcggcacgctgtcgccg
cggcgggcggcacgcgccgcgcacgagcgcatgcgccagggcagcaccggcgccgccacg
tggctcaacgagctgatctggcgcgacttctacttccaggtgctggcccaccatccgcag
gtggccggcggcgccagcttcaagccggcctacgacgccatcgcctgggaggacggcccg
caggcgcgggagcgtttcgccgcatggtgcgagggccgcaccggctacccgctggtggac
gccgccatggcccagatcaaccggacgggctacatgcacaaccggctgcgcatggtcgtg
gccagtttcctggtgaaggacctgggcgtggactggcggtggggggagcgctatttcgcg
gaaaagctcaacgatttcgacctgtccgccaacaacggcgggtggcagtgggccagttcc
agcggctgcgatgcgcaaccgtatttccgcatcttcaacccggtgagccagagccggaag
ttcgatcccaagggccgcttcatccgcctctacctgccccagctggcggccctgcccgac
cgctggctgcacgccccctgggaggccggcccactggagctcgaggccgccggggtgcga
ctgggcgacaactacccgcaccccgtcgtggaccacgacgaggcgcgccagcgcacgctg
gcgcgctatgccgtggtgaagtcggaggccgcgccggcctga
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