Paracidovorax citrulli: Aave_1492
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Entry
Aave_1492 CDS
T00451
Name
(GenBank) putative DNA topoisomerase, type I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aav
Paracidovorax citrulli
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aav03032
]
Aave_1492
03400 DNA repair and recombination proteins [BR:
aav03400
]
Aave_1492
Enzymes [BR:
aav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Aave_1492
DNA replication proteins [BR:
aav03032
]
Prokaryotic type
DNA Topoisomerases
Aave_1492
DNA repair and recombination proteins [BR:
aav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Aave_1492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ABM32082
UniProt:
A1TM94
LinkDB
All DBs
Position
complement(1655081..1656301)
Genome browser
AA seq
406 aa
AA seq
DB search
MYLPADRTARSRDAEPRPAPPERLPGGLRYVHPDTLPGLTRVLRGKHFKFRTPDGQWVTD
EEEIARIRKLAIPPAYTNVWICPLPEGHLQATGLDARGRRQYRYHPEWRQQRDEAKFERM
QAFGRALPRIRARVARDLRPRRGEPALSRTVVLATIVRLLDTTFLRVGNEEYAAANRSYG
LTTLRNRHAGVRGSRLTLRFRGKSGVEQQATVDDPRVARVVRRCQQLPGQELFQYEDEDG
TRHTVGSGDVNDYLHEIAGTDEGAPGGGMRFTAKDFRTWHGTAQALELTRIACTQPEGAP
VATAKHILAEVARQLGNTPAVCKKSYIHPAVLELGSRLASDAGPGMQAVWQRMGERATGA
RGLSAVERRLMAFLQDTARARARAERKARAAGPALPARRARRKAAA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtaccttccagccgaccgcaccgcccgctcccgcgacgccgagccccgccccgctccg
ccggagcgacttcccggcggcctgcgctacgtccaccccgacaccctgccgggactcact
cgcgtgctgcgcggcaagcacttcaaattccgcacgcccgacgggcagtgggtgacggac
gaggaagagatcgcccgcatccgcaagctggcgattccgcctgcctacacgaatgtctgg
atctgcccgctgcccgaaggccacctgcaggccaccgggctggatgcgcgcggacgccgg
cagtaccgctaccaccccgaatggcgccagcagcgcgacgaggccaagttcgagcgcatg
caggccttcggccgggccctgccgcgcatccgcgcccgcgtggcgcgcgacctccgcccc
cggcgcggcgagcccgcgctctcgcgcacggtggtgctggcgaccatcgtccggctcctg
gacacgaccttcctgcgcgtgggcaacgaggagtacgcggccgccaaccgctcctacggc
ctcaccacgctgcgcaaccggcatgcgggcgtgcgcggcagcaggctcaccctgcgcttt
cgcggcaagagcggcgtggagcagcaggcgaccgtggacgacccgcgcgtggcccgcgtg
gtgcgccggtgccagcagctgccggggcaggagttgttccagtacgaggacgaagacggc
acacggcacaccgtgggctccggcgacgtgaacgactacctgcacgagatcgcgggcacg
gacgagggagcgccgggtggcggcatgcgcttcaccgccaaggatttccggacctggcac
ggcacggcccaggccctggagctcacgcgcatcgcctgcacgcagcccgagggcgccccg
gtcgcgaccgccaagcacatcctggcggaagtggcgcgccaactgggcaacaccccggcg
gtctgcaagaagtcctacatccatcccgccgtgctggaactcggttcacggctcgcgtcg
gacgccggccctggcatgcaggcggtgtggcagcgcatgggcgagcgcgccaccggggcc
cggggcctcagcgccgtggagcgccggctgatggccttcctgcaggacaccgcccgtgcc
cgggcgcgcgccgaaagaaaagcccgcgccgccgggcctgccctgccggcccggcgcgcc
cgccgcaaggcggcggcctga
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