Paracidovorax citrulli: Aave_1916
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Entry
Aave_1916 CDS
T00451
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aav
Paracidovorax citrulli
Pathway
aav03420
Nucleotide excision repair
aav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Aave_1916
03430 Mismatch repair
Aave_1916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aav03400
]
Aave_1916
Enzymes [BR:
aav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aave_1916
DNA repair and recombination proteins [BR:
aav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aave_1916
MMR (mismatch excision repair)
Other MMR factors
Aave_1916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABM32500
UniProt:
A1TNG2
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All DBs
Position
2074331..2076787
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AA seq
818 aa
AA seq
DB search
MLPHDLFSGAPAPFGAAEPGPASPSAAASPLLQNLNDEQLAAVTLPAGHALILAGAGSGK
TRVLTTRIAWLLQNGYASPGSILAVTFTNKAAKEMTARLSAMLPVNVRGMWIGTFHGLCN
RLLRAHHKSAGLPATFQILDTQDQLSAVKRLCKQFNIDEERFPPKQMAYFISGCKEEGLR
PGDVDARDADGRKKVELYQLYEEQCQREGVVDFGELMLRSYELLRDNDPIRAHYQRRFQH
ILVDEFQDTNKLQYAWLKQIAGDVVDGRLVTHGSVLAVGDDDQSIYAFRGARVGNMQDFV
REFDVRHQIKLEQNYRSYSNILDSANALISHNSRRLGKNLRTTQGPGEPVRVYEAPTDLA
EAQWMVDEIRQLARNDGFERREIAVLYRSNAQSRVIESALFNAAVPYRVYGGLRFFERAE
IKHALAYLRLLENPHDDTSFMRVVNFPPRGIGARTVEVLQDAARQAGCSLHDAVSAVPGK
AGANLGAFVAMVDVMREQTQGQTLRGIIGQMLESSGLVEHYRAEKEGADRLENLDELINA
AESFVTQEGFGRDAVALPVDEHGASLRQSPASQGIDPSLPVVDEPLPGGVDADTGETLSP
LAAFLTHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDAVFIGGMEEGLFPHENSMSDRD
GLEEERRLMYVAITRARKRLYLSHSQTRLLHGQTRYNIKSRFFDELPEAALKWITPKQQG
FGSFAPQSGGRGGSAGTPWGGFGSGGKSETFASPPVPAQKAPPAHGLRVGLAVFHTKFGE
GKVLSLEGSGDDARAQVNFPRHGTKWLALSVAKLTVVD
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgctcccacacgacctgttttccggcgcgccagcgcccttcggcgctgccgagccgggc
ccggcctcgccgtcggcggccgcatcgcccctgctgcagaacctgaacgacgagcagctt
gccgccgtcacgctgcccgcgggccacgccctgatcctggccggcgcgggctccggcaag
acccgcgtgctcaccacgcgcatcgcctggctgctgcagaacggctatgcctcgcccggc
agcatcctggccgtcaccttcaccaacaaggccgccaaggaaatgaccgcgcgcctctcg
gccatgctgccggtgaacgtgcgcggcatgtggatcggtaccttccacggcctgtgcaac
cggctgctgcgcgcccaccacaagtcggcagggctgcccgccaccttccagatcctggac
acgcaggaccagctctcggccgtgaagcggctgtgcaagcagttcaacatcgacgaggag
cgctttcccccgaagcagatggcctacttcatcagcggctgcaaggaagagggcctgcgg
cccggcgacgtggatgcgcgcgatgcggacgggcgcaagaaggtggagctctaccagctg
tacgaggagcagtgccagcgcgagggcgtggtggacttcggcgagctgatgctgcgcagc
tacgaactgctgcgcgacaacgatccgatccgcgcgcactaccagcggcgcttccagcac
atcctggtggacgagttccaggacacgaacaagctgcagtacgcctggctcaagcagatc
gcgggcgacgtggtggacggccgcctcgtcacgcatggcagcgtgctggcggtgggcgac
gacgaccagagcatctacgcgttccgcggcgcgcgggtgggcaacatgcaggacttcgtg
cgcgagttcgacgtgcgccaccagatcaagctggagcagaactaccgcagctacagcaac
atcctcgattcggccaacgccctcatcagccacaacagccgccgcctgggcaagaacctg
cgcaccacgcaggggccgggcgagccggtgcgcgtctatgaagcgcccaccgacctggcg
gaagcgcaatggatggtggacgagatccgccagctcgcgcgcaatgacggcttcgagcgg
cgcgagatcgccgtgctctaccgcagcaacgcgcaaagccgggtgatcgagtcggcgctg
ttcaatgccgcggtgccctaccgcgtgtacggcggcctgcgctttttcgagcgggcggaa
atcaagcatgcgctggcctacctgcgcctgctggagaacccgcacgacgacacgagcttc
atgcgcgtggtgaacttcccgccgcgcggcatcggggcgcgcacggtcgaggtgctgcag
gacgcggcacggcaggccggctgctcgctgcacgatgccgtgagcgccgtgcccggcaag
gcgggggcgaacctgggcgccttcgtcgccatggtggatgtgatgcgcgagcagacgcag
ggccagacgctgcgcggcatcatcggccagatgctcgaatcgagcggactggtggagcac
taccgtgccgaaaaggaaggcgcggaccgtctggagaacctggacgaactgatcaatgcc
gccgagagcttcgtcacgcaggaaggattcggccgcgacgccgtcgcgctgccggtggac
gaacacggcgccagcctgcgccagagcccggcgagccagggcatcgatccctcgttgccc
gtggtggatgaaccgctgccgggcggcgtggatgccgacaccggcgagacgctgtcaccc
ctggccgccttcctcacgcacgccgcgctggaagccggcgacaaccaggcccaggccggg
caggatgccgtgcagctcatgaccgtgcatgcctccaaggggctggagttcgatgccgtg
ttcatcggcggcatggaggagggcctgttcccgcacgagaactccatgagcgaccgggac
ggcctggaggaggagcgccgcctgatgtacgtggcgatcacgcgcgcgcgcaagcggctc
tacctgagccattcgcagacccggctgctgcacgggcagacgcgctacaacatcaagagt
cgcttcttcgacgagctgcccgaggcggcgctgaaatggatcacgcccaagcagcagggc
ttcggcagcttcgcgccgcagtccggcggacggggcgggagtgcggggacgccgtggggc
ggcttcgggtcgggcggcaaatcagagaccttcgcgagcccgcccgtgccggcgcagaag
gcgccgcccgcgcatgggctgcgcgtggggctggcggtgttccacaccaagttcggcgag
ggcaaggtgctgtcgctcgaaggctcgggcgacgatgcgcgcgcgcaggtgaacttcccg
cggcacggcaccaagtggctggcgctgtccgtggccaagctgacggtggtggactga
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