Paracidovorax citrulli: Aave_2637
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Entry
Aave_2637 CDS
T00451
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
aav
Paracidovorax citrulli
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aav03400
]
Aave_2637
DNA repair and recombination proteins [BR:
aav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Aave_2637
Archaeal homologous recombinant proteins
Aave_2637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
ABC_tran
AAA_29
AAA_21
NTPase_1
T2SSE
AAA_22
cobW
nSTAND3
ABC_ATPase
TsaE
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ABM33209
UniProt:
A1TQH1
LinkDB
All DBs
Position
2891549..2895043
Genome browser
AA seq
1164 aa
AA seq
DB search
MKILALRLKNLNSLKGEWRIDFTAPPFSEGGLFAITGPTGAGKTTLLDAICLALYHQTPR
IGGVSQGGNELMTRHTADCLAEVEFEVRGSRYRAFWSQRRARDKPDGALQAPQVELAQVL
SDDGAARPLTRKVQEKLQQVEALTGLDFGRFTKSMLLAQGGFAAFLEAPAGKRAELLEEL
TGTDIYGKISQRVHECAREARTALESARARAGGVALLDTAERDRLVQEAAVLDEQMQVLR
ERSAATRGERDWLVAVERARERVAEADRQVRDADAAWAARDADVQRLLRAEPAMRLDPLH
GAWLAAVQDERTVASRLQETGAQAQQARARHAAALRRTEALARQVSALRHAEWQAGRDAL
AGLEAEGIDDPRHAALAARLGEWSARFQALAGLQEDIHRLEAEREGLAIRRAQEQQRQQA
ATGACLQAGTSLAGAREALEHAEGEYLRQLAGHDETHWQQEILRLVEEGHAWADARDLLT
RSEALSARRSRRATARADRQNRVATLEAALRGLEGRHQELRQGLRDQERLLAQEQRIQSL
ESHRRQLRPGEACPLCGSQEHPAVGAYEALDVSATQARLDDARRALEALDHERRARETEL
AALRAQEERAAEDEAEDGRAQADGQSQWEALCAVLAWPAGQPDGAALEAAQHRHAASLEQ
ARAQVAALGGARDRAEAARRAVQQAEREAAAAGQALALADKDVQVAGRELQALDEALERQ
TAALQSVRQTLARDLAEQGYALPREPEPWLRERGRDVQAWEAACRRRQDLQAQMPLLHEV
AENAASVARQWTERLAALPAPATRPDDGEAEDSAIDAGTVRDVARLEGWLQQAAQSVRSC
EDTLASLGGTGRELQRAQADAAGQARQRATAWESAVAASPFADAQAFLDARMEPAERKAL
QEAVDRTRQAWTAAQALHGEAGQALERLLASAQSQRGLQDVDGELAAWESQGLAAAQRQG
AIAGQLREDGLRREGLQALLAEIAAQEAEAESWQHLNGLIGSADGARYRKFAQGLTLDHL
VHLANLRLQRLHGRYLLARRTGGDLELEVVDTWQADVARDTRTLSGGESFLASLALALAL
SDLVSHKTRIDSLFLDEGFGTLDGDTLEVALDALDSLQSGGKTIGIISHVEAVKERIPVQ
IRVRKGVGLGYSALERRFAVAGGT
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctggcactgcgcctcaagaacctcaactccctcaagggcgaatggcgcatc
gatttcacggcgccgcctttttccgaaggcgggctgttcgcgatcaccgggccgacgggc
gccggcaaaaccacgctgctggatgcgatctgcctggcgctctaccaccagacgccgcgc
atcggcggcgtctcccaggggggcaacgaactcatgacgcggcataccgcggactgcctc
gcggaggtggagttcgaggtgcgtggcagccgctaccgcgcgttctggagccagcggcgc
gcgcgggacaaacccgatggcgcgctgcaggccccgcaggtggaactggcgcaggtgctg
tcggacgacggcgccgcccggccgctgacgcgcaaggtgcaggaaaagctgcagcaggtc
gaggccctgaccggactcgacttcgggcgcttcaccaagtcgatgctcctcgcgcagggg
ggattcgccgccttcctggaggcgccggccggcaagcgcgccgaactgctggaggaactg
acgggcacggacatctacgggaagatctcgcagcgcgtccacgaatgcgcgcgggaggcc
cggacggcgctggaatccgcacgcgccagggccggcggcgtcgcgctgctggacaccgcg
gagcgcgacaggctggtgcaggaggccgcggtgctggacgagcaaatgcaggtgctgcgc
gagcggagtgcggccacccggggcgagcgagactggctggtggccgtggagcgcgcgcgg
gaacgcgtggccgaggcggaccggcaggtacgcgatgcggacgctgcctgggccgcacgg
gacgccgacgtgcagcgcctgctgcgcgcggagccggcgatgcggctcgacccactgcac
ggggcctggctggccgcggtgcaggacgagcggacggtggcttcccgcctgcaggagacc
ggagcgcaggcgcagcaggcccgggcccggcatgcggcggcgctgcgccggaccgaggcc
ctggcacggcaggtgtcggccttgcggcatgccgagtggcaggcgggccgcgacgcgctg
gcggggctggaggcggaaggcatcgatgatccgcggcatgcggcgctcgcggcgcggctg
ggtgagtggagcgcacggttccaggcgctggccgggctccaggaagacatccatcgcctg
gaggcggagcgggagggcctggccatccgccgcgcgcaggagcagcaacggcagcaggcc
gccaccggcgcgtgcctccaggccgggacatccctcgcgggggcccgtgaggccctggag
catgcggagggcgaatacctccggcagttggccggccatgacgagacccattggcagcag
gaaatcctgcgcctcgtggaagaaggtcatgcctgggcggacgcgcgggatctcctgacc
cgcagcgaggcactgtctgcgcggcggagccgtcgcgcgacggcgcgtgcggaccgccag
aaccgggtggccacgctggaggcggcattgcgcgggctggaagggcggcaccaggaactg
cggcagggcctgcgcgaccaggagcgcctgctggcgcaggagcagcgcatccagtcgctg
gagtcccaccgccgccagttgcgcccgggcgaggcctgcccgctctgcggctcgcaggag
catcctgccgtcggcgcctacgaagccctggatgtgtctgcgacgcaagcccggctggac
gacgccaggcgggccctggaagcgctggatcacgaacgccgggcgcgagagaccgaactg
gcggcgttgcgcgcgcaggaggaacgggccgcggaggacgaggccgaggacggccgcgcc
caggccgacgggcagtcgcaatgggaggcactgtgcgcagtgctggcgtggcccgccggc
cagcccgatggcgccgcgctggaggcggcccagcaccggcatgccgcgtccctggagcag
gcgcgcgcgcaggtggctgcgctgggcggggcgcgggacagggccgaggcggcgcggcgg
gccgtgcagcaggccgagcgggaggccgccgccgcgggacaggcactcgcgctggcggac
aaggatgtgcaggtggcgggccgggagctacaggccctggacgaggccctggagcgccag
accgccgcgctgcaatcggtgcggcagaccctggcgcgcgatctggccgaacagggatac
gccctgccgcgggagcccgaaccctggctgcgcgaacgcggccgcgatgtgcaggcctgg
gaggcggcctgccggcgccggcaggacctgcaggcgcagatgccgctgctgcacgaggtc
gccgaaaacgccgcctcggtggcgcggcagtggacggagcggctggccgcactgccggca
ccggccacgcggcctgacgatggggaagcggaggacagtgccatcgatgccggcactgtc
cgggatgtggcacggctggagggctggctccagcaggcggcgcagtcggtgcgttcctgc
gaggacaccctggcatcgctgggcggcaccgggcgcgagctgcagcgggcccaggccgac
gcggccggacaggcccggcagcgggccaccgcctgggagtccgcggtggcggccagcccg
ttcgcggatgcgcaggctttcctggacgcccggatggagcccgccgagcggaaggcgctg
caggaagccgtggaccgtacgcggcaggcatggactgcagcccaggcgctgcacggcgag
gccgggcaggcgctggagcgtctgctggcgtctgcgcaatcgcagcgcggcctgcaggac
gtggatggggaactggctgcatgggagtcgcagggcctggcggcggcgcagcgccagggt
gcgatcgccggccagttgcgcgaggatggcttgcggcgggaaggcctgcaggccctgctg
gcggagatcgcggcgcaggaggccgaggccgaatcctggcagcacctcaatgggttgatc
gggtccgccgatggggccaggtaccgcaagttcgcccagggcctcacgctggaccacctg
gtgcacctggccaacctccggctgcagcggctgcatggccgctacctgctggcgcggcgc
acgggcggcgacctggagctggaggtggtcgatacctggcaggccgacgtggcccgcgac
acgcgcaccctgtccggcggcgagagcttcctggcgagcctggcgctggctctggcgctc
tccgacctcgtgagccacaagacgcgcatcgactcgctctttctcgacgaaggtttcggc
accctcgacggcgacacgctcgaagtcgcgctggatgcgctggacagcctgcagtccggc
ggcaagaccatcggcatcatcagccacgtcgaagccgtgaaggagcgcattcccgtgcag
atccgcgtgcgcaagggcgtgggcctgggctacagcgcgctggagcggcgcttcgcggtg
gccggcggcacctga
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