Paracidovorax citrulli: Aave_2644
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Entry
Aave_2644 CDS
T00451
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
aav
Paracidovorax citrulli
Pathway
aav03030
DNA replication
aav03430
Mismatch repair
aav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aave_2644
03430 Mismatch repair
Aave_2644
03440 Homologous recombination
Aave_2644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aav03032
]
Aave_2644
03400 DNA repair and recombination proteins [BR:
aav03400
]
Aave_2644
Enzymes [BR:
aav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Aave_2644
DNA replication proteins [BR:
aav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Aave_2644
DNA repair and recombination proteins [BR:
aav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Aave_2644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_18
AAA_14
Rad17
AAA_30
AAA_16
AAA_19
AAA_5
AAA_assoc_2
AAA_7
AAA_24
TsaE
Adeno_E1B_55K_N
nSTAND3
SKI
AAA_2
Herpes_Helicase
PIF1
RNA_pol_Rpb1_3
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ABM33216
UniProt:
A1TQH8
LinkDB
All DBs
Position
2906537..2908642
Genome browser
AA seq
701 aa
AA seq
DB search
MPGSSLSPNVSGAARPAGAGDPRRIPRMSYLVLARKYRPKTFSEMVGQEHVVQALSNALV
QQRLHHAYLFTGTRGVGKTTVSRILAKSLNCQGEDGQGGITATPCGVCQACRDIDAGRFV
DYTELDAASNRGVDEVQGLLEQAVYKPVQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPE
YLKFVLATTDPQKVPVTVLSRCLQFNLRPMAPETVLEHLTRVLARESVPAEPQALRLLAR
AARGSMRDALSLTDQAIAFGSGQLQEAGVRQMLGSVDRSYVFRLIDALARGDGRTVVETS
ESLRMHGLSAASTLEEMSAVLQRMAVFQAVPQMADVVDPADPEASEIARLAGTLPADETQ
LLYSICLHGRTELGLAPDEYAALTMALLRLLAFKPAAEGGTPPAEKKTLKPPQAQPPAPE
PEPASAAEPVPSIAASGAVSAPVEPATAAPPGPEPRPAEAHAPEPEPHSPAPLEPPSGEA
PWADDAPPPAAVAATAAPAPVQEPSSSAAVAAAVRLPVRTPADLQAHRPAEVALPAASTP
DFVAIPVRVAPEPGMRLQPAAAPGALPASARYTPTEEGDVWHATVMQLVAAEAINALVRE
LALQSQLVARDADHWLLRVERESLNQPTARERLRAALEAAGFARQISVEVGTVIDSPARR
NAHAAAERQRRAQEIVENDPYVQALVRDFGARIVPGSIKPA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcagttccctgtcaccaaatgttagtggcgccgcgcgcccagcaggggctggc
gacccccgtagaatcccgcggatgtcctatctcgtgctcgcccgcaaataccgccccaag
accttctcggagatggtcgggcaggaacatgtggtgcaggcgctctcgaatgcgctggtc
cagcagcgcctgcaccatgcgtacctgttcacgggcacgcgcggggtgggcaagaccacg
gtgtcgcgcatcctggccaagtcgctcaactgccagggcgaggacgggcagggcggcatc
accgccacgccctgcggcgtatgccaggcctgccgggacatcgatgccggccgcttcgtg
gattacaccgagctcgatgccgcctccaaccgcggcgtggacgaagtgcagggcctgctg
gagcaggccgtgtacaagccggtgcagggccgcttcaaggtcttcatgatcgacgaggtc
cacatgctcacgaacaccgcgttcaacgcgatgctcaagacgctggaggagccgcccgaa
tacctgaagttcgtgctggccacgaccgacccgcagaaggtgccggtcaccgtgctcagc
cgctgcctgcagttcaacctgcggcccatggcgccggaaaccgtgctggagcacctcacc
cgggtactcgcccgggaaagcgtgccggccgagccgcaggcgctgcggctgctggcgcgc
gcggcccgcggttccatgcgcgatgcgctgtcgctcaccgaccaggccatcgccttcggc
agcggccagctccaggaagccggcgtgcggcagatgctgggcagcgtggaccgcagctac
gtgttccgcctcatcgatgcgctggcgcgcggcgacggccgcacggtggtggagacttcc
gaatccctgcgcatgcacgggctttccgccgcctccacgctcgaggaaatgagcgccgtg
ctgcagcgcatggccgtgttccaggccgtgccccagatggcagacgtcgtggacccggcc
gatccggaggcctccgaaatcgcgcggctggccggcacgctgcccgccgacgagacgcaa
ctgctctacagcatctgcctgcacggacgcacggaactcggcctcgcgcccgacgagtat
gcggccctcaccatggcgttgctgcggctgctggccttcaagcctgccgcggagggcgga
acgcccccggcggaaaaaaaaacactgaaaccgccccaggcgcagcctccggcgcctgag
ccggagccggcatccgccgcggaacctgtaccttccatcgccgcatccggggcggtctcc
gcgcctgtggagcccgccaccgcggcaccgcccgggccggagccccggcctgccgaagcg
cacgcgcccgagcccgagccgcattcccccgcgccgctggagcccccctccggcgaggcc
ccctgggcggacgatgccccccccccggccgcggtcgccgccacggcggcaccggccccc
gtgcaggagccgtcgtccagcgccgccgtggcggcggccgtgcgcctgccggtcaggacg
ccggccgacctgcaggcgcaccggcctgccgaggtcgcgctacctgccgccagcaccccc
gatttcgtggccattcccgtgcgggtcgcgccggagcctggcatgcggctgcagccagcg
gccgcgcccggcgccctgccggcctcggcccgctacacgccgacggaagagggcgatgtc
tggcatgccaccgtgatgcagctcgtcgcggccgaggccatcaatgccctggtgcgcgaa
ctcgcgctgcagtcccagctggtggcccgcgacgccgaccactggctgctgcgcgtggag
cgcgagtcgctcaaccagcccacggcccgcgagcgcctgcgcgccgcgctggaggcggcc
ggcttcgcccgccagatcagcgtggaggtgggcacggtcatcgacagccccgcgcggcgc
aatgcccatgcggccgcggagcgccagcggcgcgcgcaggagatcgtggaaaacgatccc
tacgtgcaggcgctggtgcgggacttcggggcgagaatcgttcctggcagcatcaaaccc
gcatga
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