Paracidovorax citrulli: Aave_3286
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Entry
Aave_3286 CDS
T00451
Name
(GenBank) histone family protein DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
aav
Paracidovorax citrulli
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aav03032
]
Aave_3286
03036 Chromosome and associated proteins [BR:
aav03036
]
Aave_3286
03400 DNA repair and recombination proteins [BR:
aav03400
]
Aave_3286
DNA replication proteins [BR:
aav03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Aave_3286
Chromosome and associated proteins [BR:
aav03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Aave_3286
DNA repair and recombination proteins [BR:
aav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Aave_3286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ABM33846
UniProt:
A1TSA8
LinkDB
All DBs
Position
3634338..3634667
Genome browser
AA seq
109 aa
AA seq
DB search
MTRSDLVEELAARFGQLTQRDAEAAVKTILDAVGDALVRGHRIEVRGFGSFSVNRRPPRM
GRNPRSGEAVHIPEKRVPHFKPGKALREAVDRRTAEMGIGIAADPSDAA
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgacccgatcagacctcgtcgaagaacttgccgcccgtttcggccagctcacgcaacgc
gatgccgaagccgccgtcaagaccatcctggatgccgtgggcgatgcgctggtgcgcggc
caccgcatcgaggtgcgcgggttcggcagcttttcggtcaaccgccgcccgccgcgcatg
gggcgcaacccccgcagcggcgaggccgtgcacatccccgagaagcgcgttccgcatttc
aagccgggcaaggccctgcgcgaagccgtggaccgccgcaccgccgagatgggcatcggc
atcgcggccgacccgtccgacgccgcctga
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