Paracidovorax citrulli: Aave_3407
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Entry
Aave_3407 CDS
T00451
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
aav
Paracidovorax citrulli
Pathway
aav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Aave_3407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aav02000
]
Aave_3407
Enzymes [BR:
aav01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Aave_3407
Transporters [BR:
aav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Aave_3407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
ABC_ATPase
AAA_22
AAA
AAA_30
RsgA_GTPase
AAA_21
AAA_25
TsaE
AAA_29
Zeta_toxin
Pex24p
AAA_24
AAA_28
AAA_5
HUTI_composite_bact
AAA_33
NB-ARC
MobB
MMR_HSR1
Rad17
DUF2721
Motif
Other DBs
NCBI-ProteinID:
ABM33964
UniProt:
A1TSM6
LinkDB
All DBs
Position
3763372..3765174
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AA seq
600 aa
AA seq
DB search
MQASAPQGAPATDTAAAPASAPPSLFARLRRMSSYFGGQRLAWSLAVLATVVAAVTEPLI
PALLKPLLDQGFTEGSLKLWLVPVAVMGVFFVRGLAQFGGQYALARIANEGMLKLRETLF
ERLLSAEMALFSRQSASTLSNTVVYEVQNGATQLVQALLGISRDGFTLVALLVYLLYLNW
QLTLIVAFLVPGVAWIMKTLSRRLYQITKSSQEATDQLAYVVEENVLAHRMVRLHSAQPA
QARRFGVLSQSLRRLAIKATIASAAMTPLTQLLAAAALSAVICVALWQSHIGQTREVTVG
GFAAFMAAMLMLIAPIRRLADVANPLTRGVAALERGLVLLESAPAESGGRHAPKERAQGA
LELEGVTVAFGAELAPALDRLHLSVRPGEVVALVGPSGAGKTTLVNLLPRFLQPTEGRVL
LDGRPLEEWNLSALRSQFAMVSQDVVMFNDTVAANVALGADVDEARVQACLEAANLSAHV
ASMPQGMHTLVGHNAVQLSGGQRQRLAIARALYKDAPILILDEATSALDTESERLVQDAL
QRLMRGRTTLVIAHRLSTIEHADRVVVMERGRIVEQGTDAELQARGGLYARLKGSALAGG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcctccgccccccagggagcccccgcgacggacaccgccgcggctcccgcatcc
gcccccccttccctgttcgcgcgcctgcggcgcatgtcctcgtacttcggggggcagcgc
ctcgcctggtcgctggcggtgctggccaccgtggtggccgcggtgaccgagccgctgatc
cccgcgctgctcaagcctttgctggaccagggcttcacggaaggctcgctcaagctctgg
ctggtgccggtggccgtcatgggggtgtttttcgtgcgcgggctggcgcagttcggcggg
caatacgccctggcccgcatcgccaacgaaggcatgctgaagctgcgcgagacactgttc
gagcgcctgctgtcggcggagatggcgctgttttcccgccagtcggcgagcacgctgtcg
aacacggtggtgtacgaagtgcagaacggcgccacgcagctggtgcaggcgctgctgggc
atttcgcgcgacggcttcacgctggtcgcgctgctggtgtacctgctctacctgaactgg
cagctgacgctcatcgtcgcgttcctggtgcccggcgtggcatggatcatgaagacgctg
tcgcgccgcctctaccagatcaccaagagcagccaggaagcgacggaccagctcgcctac
gtggtggaggaaaacgtgctggcccaccgcatggtgcggctgcacagcgcgcagcccgcg
caggcgcgccgcttcggggtgctcagccagagcctgcgacgcctggcgatcaaggccacg
atcgcctcggccgcgatgaccccgctgacgcaattgctggccgcggcggcgctgtcggcg
gtgatctgcgtggcgctctggcagagccacatcgggcagacgcgggaagtgaccgtgggc
ggcttcgcggccttcatggcggcgatgctgatgctgatcgcgcccatccgccggctggcg
gacgtggccaacccgctgacgcgcggcgtcgccgcgctggagcgcggcctggtgctgctg
gagagcgcgccggccgagtcgggcggccggcacgcgccgaaggagcgtgcgcagggcgcg
ctggaactcgagggcgtgacggtggccttcggggccgagctggcgcccgcgctggaccgg
ctgcacctgtcggtacggcccggcgaggtcgtcgcgctggtgggcccctcgggtgccggc
aagaccacgctggtcaacctgctgccgcgcttcctgcagcccaccgagggccgcgtgctg
ctcgacggccggcctctggaggaatggaacctgtccgcgctgcgctcgcagttcgccatg
gtgagccaggacgtggtgatgttcaacgacaccgtggcggccaacgtggcgctgggcgcg
gacgtggacgaggcgcgcgtgcaggcctgcctggaagcagccaacctgtcggcgcacgtg
gcgtcgatgccacagggcatgcacacgctggtgggccacaacgccgtacagctctccggt
ggccagcgccagcgcctggcgatcgcgcgggcgctctacaaggatgcgccgatcctgatc
ctggacgaggccacctcggccctcgacaccgaatccgagcggctggtgcaggacgccctg
cagcggctcatgcgcgggcgcaccacgctggtgatcgcgcaccgcctctccaccatcgag
catgccgaccgggtggtggtgatggagcgcggccgcatcgtggaacagggcacggatgcc
gaactgcaggcgcgcggcggcctgtatgcgcgcctgaagggctccgccctcgcgggcggc
tga
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