Paracidovorax citrulli: Aave_3453
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Entry
Aave_3453 CDS
T00451
Name
(GenBank) transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
aav
Paracidovorax citrulli
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aav03000
]
Aave_3453
Transcription factors [BR:
aav03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Aave_3453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
AIRS
TetR_N
HTH_7
Motif
Other DBs
NCBI-ProteinID:
ABM34010
LinkDB
All DBs
Position
3815934..3816926
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AA seq
330 aa
AA seq
DB search
MTIQHVAREAGVSAATVSRVFNTPDKVVPATRAAVLGAAERLGYVPNATARTLRTQRSHV
IGVVLPTLLNPVFAECLDGIAQAAARGGYAILPYTTDYAVAQEERAVHLLLAGNVDGMVL
VVSQPRTSVALERLAAARLPYALAYNRHPDHPCVSVDGEGAVAELVAQLAALGHRRIAMV
SGQLAASDRAQQRCRGFMRGMAQAGLAPARVVEVPFVETAVQEVAELLRGPRPPTALVCS
NDLIAIRCLRAAHMAGLEVPRDLSVVGFDGIALGRDLTPVLGTVAQPNVDIGRCSVELLI
EAMASHRLPTREDSLTLPHHFRAGGSCAAI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccagcacgtcgcccgcgaagccggggtttcggccgccaccgtttcccgggtg
ttcaatacgcccgacaaggtggtgcccgccacgcgcgccgcggtgctcggcgccgccgag
cggctgggctacgtgcccaacgccacggcgcgcacgctgcgcacccagcgcagccacgtc
atcggcgtggtgctgcccacgctgctgaacccggtgttcgcggaatgcctggacggcatc
gcgcaggccgcggcgcgggggggctacgccatcctgccgtacaccaccgactatgcggtg
gcgcaggaagagcgcgcggtgcacctgctgctggcgggcaatgtggacggcatggtcctc
gtggtgtcccagccccggacctcggtggcgctggagcggctggccgcggcgcgactgccg
tatgcgctggcctacaaccggcatccggaccatccctgtgtttccgtggacggcgaaggc
gccgtggcggaactggtcgcgcaactggccgcgctggggcaccgccgcatcgccatggtg
agcgggcagctcgcggcgtccgaccgcgcgcagcagcgctgccgcggcttcatgcgcggc
atggcgcaggcggggctggccccggcgcgggtcgtggaagtgcccttcgtcgagaccgcc
gtgcaggaggtggccgagctgctgcgcggcccgcggccccccaccgccctggtctgctcc
aacgacctgatcgcgatccgctgcctgcgcgcggcgcacatggcgggcctggaggtgccg
cgcgacctcagcgtggtgggcttcgacggcatcgcgctgggcagggacctgacgcccgtg
ctcggcacggtggcgcagcccaatgtcgatatcggccgctgcagcgtggaactgctgatc
gaggccatggcgtcgcaccggctgcccacccgggaagacagcctgacgctgccccatcac
ttccgcgcgggagggtcgtgcgcggccatctga
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