Paracidovorax citrulli: Aave_3454
Help
Entry
Aave_3454 CDS
T00451
Name
(GenBank) putative periplasmic solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
aav
Paracidovorax citrulli
Pathway
aav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Aave_3454
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aav02000
]
Aave_3454
Transporters [BR:
aav02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Aave_3454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
ABM34011
UniProt:
A1TSS3
LinkDB
All DBs
Position
3817041..3818054
Genome browser
AA seq
337 aa
AA seq
DB search
MRSALQKLARAAALALGLAATGGAFAQTAICYNCPPEWADWGTQLKAIKARTGVTVPPDN
KNSGQSLAQLSAERASPVADVTYLGVTFAIQAQKDGLLGTYQPAGWKDIPDGLKDPAGHW
FTIHSGTLGFMVNVDALGGKPVPKSWADLLKPEYKGLIGYLDPASAFVGYVGAVAANQAR
GGTLENFGPGIDYFKALQKNEPIVPKQTAYARVLSGEIAILLDYDFNAYRAKYKDGANVQ
FVIPAEGTVVVPYVMGMVAKAPHAADAKKVLDFVLSDEGQAIWAKAYLRPVRAAAMPADV
QARFLPASEYARAKTVDYGRMAAVQKAFSDRYLRDVK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccgccctccagaaactcgcccgcgccgccgcgctcgccctcggcctggccgcc
accggcggtgccttcgcgcagaccgccatctgctacaactgcccgcccgaatgggccgac
tggggcacccagctcaaggccatcaaggcccggaccggcgtgaccgtgccgccggacaac
aagaactccggccagtcgctcgcacagctgtccgccgaacgcgccagccccgtggccgac
gtgacctacctcggcgtgaccttcgccatccaggcgcagaaggatggcctgctgggcacc
taccagcccgccggctggaaggacattcccgacggcctgaaggacccggccggccactgg
ttcacgatccattcgggcacgctgggcttcatggtcaacgtcgatgcgctgggcggcaag
ccggtgccgaagtcgtgggccgacctgctcaagcccgagtacaagggcctgatcggctat
ctggacccggcttcggccttcgtgggctacgtgggcgcggtggccgccaaccaggcgcgc
ggcggcacgctggagaacttcggccccggcatcgactacttcaaggcgctgcagaagaac
gagccgatcgtgcccaagcagaccgcctatgcgcgcgtgctctcgggcgagatcgcgatc
ctgctggactacgacttcaacgcctaccgcgcgaagtacaaggacggcgccaacgtgcag
ttcgtcatccccgccgagggcacggtggtggtgccctacgtgatgggcatggtggcgaag
gcgccccatgccgccgacgcgaagaaggtgctggatttcgtgctctccgacgagggccag
gcgatctgggccaaggcctacctgcggccggtgcgcgccgccgccatgcccgccgacgtg
caggcccgcttcctgcccgccagcgaatatgcccgcgcgaagacggtggactacggccgc
atggccgcggtgcagaaggcgttctccgaccgctacctgcgggacgtgaaatga
DBGET
integrated database retrieval system
