Paracidovorax citrulli: Aave_4471
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Entry
Aave_4471 CDS
T00451
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
aav
Paracidovorax citrulli
Pathway
aav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Aave_4471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aav03400
]
Aave_4471
Enzymes [BR:
aav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aave_4471
DNA repair and recombination proteins [BR:
aav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Aave_4471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Helicase_C
Zn_ribbon_PriA
SopE_GEF
ADDB_N
AAA_30
AAA_22
AAA_16
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ABM35010
UniProt:
A1TVM2
LinkDB
All DBs
Position
4967646..4969937
Genome browser
AA seq
763 aa
AA seq
DB search
MYRDAHKVIHTPARKPSVHPAAACGRLGRRPALASVPSVSQPLSRVPSDASPPAATDGGA
IVSVAVQTPAHSAVGGPLSYASAHPLEPGTLVRVPLGTREVLGVVWDAPADAPELPRGAA
VRPVAGVLEGLAPLDAAWRRLVAFAARYYQRALGEVALAALPPQLRDLTPAQLARRLRRA
PAATAGEAAPPYAPEPHALSAEQQAATDAIAARPGPFLLYGSTGSGKTEVYLRCVQQALA
ADPSAQVLVMVPEINLTPQLEARFLARFAPLYGADSVVSLHSGMTHPQRLKSWLAAHAGQ
ARIVLGTRMAVFASLPGLALIVVDEEHDASYKQQEGARYSARDLAIWRGREQDAKVILGS
ATPSLESWHASRPPTDGDPGGRYLRLHMPSRIGAGALPRVRLVDMAQQPRGAVFSPPLVA
AITERVERGEQCLVLLNRRGFAPVLHCTECGWKSDCPHCSAHQVFHKIDRSLRCHHCGFA
QRVPYACPGCGNPDIAPIGRGTEQLEEQLAALLRNVITPERRAARVARIDADTTKAKGAL
EEQLAQVHAGEVDVLVGTQMVAKGHDFRRITLVAAVQPDGALFSSDFRAPERLFALLMQA
AGRAGRDAGYVAAQGGACEMWVQTYHPDHAVYAALRRHDYPAFAARQLAERAEAAMPPFA
FQALVRADARTQEVAQTFLAACAEAARQAGLPGLEQVTVFPPVPLAIQRVANVERAQMLL
ESPSRAALQRFLAAWQPLLHACRADPAHRGLVRWLVDVDPLAI
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgggatgcccacaaagttatccacaccccggcccgaaaaccttccgtgcacccg
gcggccgcttgcggcagactcgggcgccgccctgcacttgcctccgtcccttccgtgtcc
caacccctgtcccgcgtcccgtccgatgcatcgccacccgccgcaaccgacggcggcgcg
atcgtctcggtcgccgtccagacgcccgcgcacagcgcggtgggcggcccgctgagctac
gcgagcgcgcatccgctggagccgggcacgctggtgcgggtgcccctgggcacgcgcgaa
gtgctgggcgtggtgtgggatgcgccggccgatgcgccggagctgccgcgcggcgccgcg
gtgcggccggtggcgggcgtgctggaggggctggcgccgctggacgccgcctggcggcgg
ctggtggccttcgcggcgcgctactaccagcgggcgttgggcgaggtggcgctcgccgcc
ctgccgccgcagttgcgcgacctcacgcccgcgcagctcgcgcggcgcctgcgccgcgcg
ccggccgccaccgccggggaagccgcgccgccctatgcacccgagccccacgccctgagc
gccgaacagcaggcggccacggacgccatcgccgcccggcccggacccttcctgctctac
ggcagcacgggcagcggcaagaccgaggtgtacctgcgctgcgtgcagcaggccctggcc
gcggatccctccgcccaggtgctggtgatggtgccggagatcaacctcacgccgcagctg
gaggcgcggttcctcgcccgcttcgcgccactctacggggcggacagcgtggtgtcgctg
cacagcggcatgacccacccgcagcggctgaaaagctggctggccgcgcatgccggccag
gcgcgcatcgtgctgggcacgcgcatggcggtgttcgcgagcctgccgggcctggcgctc
atcgtggtggacgaggagcacgacgcgagctacaagcagcaggaaggcgcgcgctactcg
gcgcgcgacctggccatctggcgcgggcgcgagcaggacgcgaaggtgatcctcggctcg
gccaccccgtcactggagagctggcacgcgagccgcccgcccacggacggtgaccccggc
gggcgctacctgcggctgcacatgcccagccggatcggcgcgggcgcgctaccgcgcgtg
cggctggtggacatggcgcagcagccgcgcggcgccgtgttctcgccgccgctcgtggcc
gccatcaccgagcgcgtggagcgcggcgaacagtgcctggtgctgctcaaccgccgcggc
ttcgccccggtgctgcactgcacggagtgcggctggaagagcgactgcccgcactgcagc
gcccaccaggtgttccacaagatcgaccgctcgctgcgctgccaccactgcggcttcgcg
cagcgcgtgccctacgcctgccccggctgcggcaacccggacatcgcgccgatcgggcgc
ggcaccgagcaactggaagagcagttggccgcgctgctgcgcaacgtgatcacgccggag
cgccgcgccgcgcgcgtggcccgcatcgacgccgacaccacgaaagccaagggcgcgctg
gaagaacagctcgcccaggtgcatgcgggcgaggtggacgtgctggtgggcacgcagatg
gtcgccaagggacacgatttccggcgcatcacgctggtggcggcggtacagccggacggc
gcgctgttctccagcgatttccgggcgcccgagcggctgttcgcgctgctcatgcaggcg
gcgggccgtgcgggccgggacgcgggctacgtggccgcccagggtggcgcctgcgagatg
tgggtgcagacctaccaccccgaccatgcggtgtacgcggcgctgcgccggcacgactat
ccggccttcgccgcgcggcagctcgccgagcgcgccgaggccgccatgccgcccttcgca
ttccaggcgctggtgcgtgccgacgcgcgcacgcaggaggtggcgcagaccttcctggcc
gcctgcgccgaggcggcccggcaggcgggccttccggggctggagcaggtgacggtgttc
ccgcccgttcccctggcgatccagcgcgtggccaacgtggagcgcgcgcagatgctgctg
gagagcccgagccgcgcggcgctgcagcgcttcctggcggcctggcagccgctgctgcat
gcctgccgcgcggacccggcgcaccgggggctggtgcggtggctggtggacgtggatccg
ctggcgatctga
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