Alteromonas stellipolaris R10SW13: AVL56_00070
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Entry
AVL56_00070 CDS
T04403
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aaw
Alteromonas stellipolaris R10SW13
Pathway
aaw03030
DNA replication
aaw03410
Base excision repair
aaw03420
Nucleotide excision repair
aaw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AVL56_00070
03410 Base excision repair
AVL56_00070
03420 Nucleotide excision repair
AVL56_00070
03440 Homologous recombination
AVL56_00070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaw03032
]
AVL56_00070
03400 DNA repair and recombination proteins [BR:
aaw03400
]
AVL56_00070
Enzymes [BR:
aaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AVL56_00070
DNA replication proteins [BR:
aaw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AVL56_00070
DNA repair and recombination proteins [BR:
aaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AVL56_00070
NER (nucleotide excision repair)
GGR (global genome repair) factors
AVL56_00070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
AMJ92861
LinkDB
All DBs
Position
complement(14859..17651)
Genome browser
AA seq
930 aa
AA seq
DB search
MTDSKKPPFILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVVNMLKSLIRQYNPTHMAV
IFDAKGKTFRDDIYEEYKANRPPMPEELRSQIEPLHTIIKAMGLPVIVESGVEADDVIGT
LACRATEHGIDTLISTGDKDMAQLVNDNVTLINTMTNQIMDIEGVNTKFGIPPELVIDFL
ALKGDKVDNIPGVPGVGDKSAQALLNGIGGISAIYDNLDKIADLSFRGSKTMATKMQEYE
EQARLSYTLATIAIDLDLEYKIDELRPTAPDNQTLQSMFAEYEFKRWHTEISALIAGDGS
ESSKPTSVESGSDSSDTDEVLPESNIDKSGYEVVLDEATFEAWIEKLKAAPLIAVDTETT
SVNYMEAELVGVSFCIEPGAAAYVPVAHDYPDAPTQLSREYVLAALKPILESETIIKVGQ
HIKYDKNVLAHYDITLNGIGFDTMLESYVLNSTAQRHDMDSLALAYLGHKTIHFEEIAGK
GAKQLTFNQIGLEEAGPYAAEDADITMRLHQAIWAKLENEPKLKTLLVDVEVPVACVLSR
MEQQGVLIESQRLRQQSQDLATRIAELEKEVHEEAGEVFNLGSPKQLQHILFEKMSLPVI
KKTPKGAPSTSEEVLQELALEFPLPKKLMEYRGLTKLKNTYTDKLPKMINHRTGRVHTSY
HQAITATGRLSSTDPNLQNIPIRNEEGRKVRQAFVPREGYKIVAADYSQIELRIMAHLSG
DEGLLDAFAHGRDIHKATAAEVFGVTLDEVTTEQRRSAKAINFGLIYGMSAFGLAKQLNI
PRHEAQKYMDLYFERYPGVLEYMDSTREGAKEKGYVETVFGRRLYLPDIKASNGARRKGA
ERAAINAPMQGTAADIIKMAMIKVDDWITSLESDNVIMMMQVHDELVFEIKEEHLEEQVK
NIVSLMEQAAVLNVPLVVEAGVGDNWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgacagattcgaaaaagcccccttttattctagtagatggatcatcttatctatttaga
gcatttcacggattaccacctctgacgaactcaaaaggtcaggataccggtgcgatctat
ggtgttgtcaacatgctgaaaagcttgattagacagtacaaccctactcacatggcagtc
atctttgatgccaaaggtaaaacgtttcgcgacgatatttatgaagaatataaagcgaat
cgcccacctatgccggaagagttacgtagtcaaatagaaccattacataccatcatcaaa
gccatggggttacctgtaatcgttgagtctggcgttgaagccgatgatgttataggtacc
ctagcctgtcgtgccacagagcacggtatcgatacgttgatcagtactggcgataaagac
atggcgcaactcgtcaacgacaatgtcaccttgatcaataccatgacgaatcagattatg
gatattgaaggggtaaacacgaaattcggtattccaccggaactggtaatcgacttctta
gcccttaagggtgacaaggtagataatattcctggcgtacccggtgtgggtgataaaagt
gcccaagcgctattaaacggtattggtggcatcagtgctatctatgacaatcttgataaa
attgccgatctctcatttagagggagcaagacgatggcaactaaaatgcaagagtatgaa
gaacaagctcgcttgtcatacacccttgccacgattgccattgatttagatctagaatac
aaaatagatgagcttcgccctactgctccggataaccaaaccttacagtcgatgtttgca
gagtatgaattcaagcgctggcataccgaaattagcgcattgatcgcaggtgatggtagt
gagtcctcaaagccaacgagtgttgagagcggatcagattcaagcgatacagatgaagta
ttaccagaaagtaatatcgataaatctggttatgaggtggtgttagatgaagctacgttt
gaggcttggattgaaaaactaaaagcagcaccgcttattgctgttgatactgaaacgacc
agtgttaactacatggaagctgaacttgttggtgtttctttttgtattgaacctggtgct
gcggcttacgtgccagttgctcatgattatcctgatgcacccacgcagttatcaagagag
tacgtgctagcagcattaaagcctattttagagtctgaaaccatcatcaaagtgggtcag
cacattaaatatgacaagaatgtactcgcccattacgacatcaccctaaatggtatcggc
tttgacactatgctggaaagctatgtgttaaacagcaccgcgcaacgacatgacatggat
tcgctagcccttgcttatttaggtcataaaacgattcactttgaagaaattgccggcaaa
ggcgctaaacagcttacgtttaaccaaattgggttagaagaagctggcccttatgctgcc
gaagatgctgatattactatgcgccttcatcaagcaatatgggcaaagctagagaacgaa
cccaaacttaaaacgttgttggttgatgttgaagtgccggttgcttgtgttttatctcgt
atggaacagcaaggtgtattaattgaaagccaacggttgcgccagcagagccaagactta
gctacgcgtattgctgagctagaaaaagaagtgcatgaagaagcaggcgaagtatttaat
ttaggttcaccaaaacagcttcaacacattttgtttgagaagatgtcgttaccggttatc
aagaaaacccccaagggtgccccttctacttctgaagaagtattacaagaacttgccctt
gaattcccgttacctaaaaagttaatggagtatagagggttaaccaagcttaagaatacg
tataccgacaaactccctaaaatgattaatcatcgcacgggtcgtgttcatacttcctac
catcaagctattacggcaacgggccggttgtcgtcaacggatcctaaccttcaaaacatt
cctattcgaaatgaagaaggccgtaaggtaagacaagcatttgttccacgtgaaggctat
aagattgtagctgccgattattctcaaattgaacttagaataatggcccatttgtcgggc
gatgaaggtcttcttgatgcatttgctcacggcagagacattcacaaagctaccgctgca
gaagtatttggggttacgcttgatgaagtgacaacggagcaacgtcgtagtgctaaggcc
ataaactttggtttgatctatggaatgagcgcctttggccttgccaaacaacttaatatt
ccacgtcacgaagcacaaaaatacatggacttatattttgagcgctaccctggcgtgctt
gagtacatggacagcactagagaaggcgctaaagaaaaaggttacgtggaaacagtgttt
ggtcgacgcttgtacctacccgacattaaagccagtaatggggcgcgccgtaaaggcgca
gaacgggcagcaattaatgcgccgatgcaaggcacagctgccgacatcattaaaatggcc
atgataaaggttgatgactggatcacctcacttgaaagcgacaatgtaatcatgatgatg
caggtacacgatgaattggtgtttgagattaaagaagaacatctagaggaacaggttaaa
aatatcgtcagcttgatggaacaagccgctgtattaaatgtgccgctggtggttgaagcg
ggcgtgggcgataactgggatgaagctcactaa
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