Alteromonas stellipolaris R10SW13: AVL56_00515
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Entry
AVL56_00515 CDS
T04403
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
aaw
Alteromonas stellipolaris R10SW13
Pathway
aaw00260
Glycine, serine and threonine metabolism
aaw00460
Cyanoamino acid metabolism
aaw00630
Glyoxylate and dicarboxylate metabolism
aaw00670
One carbon pool by folate
aaw00680
Methane metabolism
aaw01100
Metabolic pathways
aaw01110
Biosynthesis of secondary metabolites
aaw01120
Microbial metabolism in diverse environments
aaw01200
Carbon metabolism
aaw01230
Biosynthesis of amino acids
aaw01240
Biosynthesis of cofactors
aaw04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AVL56_00515 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AVL56_00515 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AVL56_00515 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AVL56_00515 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AVL56_00515 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AVL56_00515 (glyA)
Enzymes [BR:
aaw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AVL56_00515 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AMJ92932
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Position
115134..116387
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AA seq
417 aa
AA seq
DB search
MFCKDDQIAEYDNEIWQAVLEEEKRQQDHVELIASENYTSARVMQAQGTQLTNKYAEGYP
GKRYYGGCEHVDVVEQLAIDRAKALFSADYANVQPHSGSQANAAVFMALLEPGDTVLGMS
LAHGGHLTHGSKVSFSGKIYHSVQYGLNEATGEIDYDQVAALAHEHKPKMIIAGFSAYSR
VVDWQRFRDIADEVGAWFFVDMAHVAGLVAAGQYPNPVPIADVVTTTTHKTLRGPRGGLI
LAKHNEALEKKFNSAVFPGGQGGPLMHVIAAKAISFKEAMEADFVEYQQQVIDNARAMAD
VFKKRTYKVVSGGTDNHLFLLDLIDKSMTGKDADAALGKANITVNKNSVPNDPQSPFVTS
GLRIGTPAITTRGFGIQQVTDLTHWICDVLDDIHNEDMIATVRANVLALCEAHPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttttgcaaagatgatcagattgccgagtacgataatgaaatttggcaagctgtgctt
gaagaagaaaaacgccaacaggatcatgtggaactgattgcgtctgaaaattataccagc
gcccgggtgatgcaggcgcaaggcactcagctaacgaataaatatgctgaaggttaccct
ggtaaacgttactacggcggttgcgaacatgttgacgtagtagagcaattggctatcgat
agagcgaaagcgttgttttcagctgattacgcaaacgtgcaaccccattctggatcgcaa
gctaacgccgctgtatttatggcattgctcgagccaggcgatacggtattaggcatgagc
ttagcgcacggtgggcacctaacccacggttcaaaggttagcttttcaggcaaaatttat
cattctgtgcaatacggcttaaatgaagctactggcgaaatcgactatgaccaagtagcg
gcgttggcgcacgaacacaaacctaaaatgattatcgccggtttttcggcttattctcgc
gtagtagattggcagcgttttcgcgatattgccgatgaagttggcgcatggttcttcgtt
gatatggcccatgtggcaggcttagtagcggcggggcagtaccctaacccagtacccatt
gccgatgtggtcaccaccactacccataaaacccttcgcggccctcggggcgggcttatt
ttggccaaacacaatgaagctttagaaaagaaatttaactcggcggttttccctggcggc
caaggtggcccgctaatgcatgttattgcagccaaagccatttcgtttaaagaagctatg
gaagcagactttgttgaataccaacagcaggttatcgacaacgcccgtgccatggccgat
gtatttaaaaaacgtacctataaagtggtatcgggcggtaccgataaccatttatttttg
ctcgatttaattgataaaagcatgaccggtaaagatgctgatgccgcccttggtaaggca
aatattacggtaaataagaactcagtgcctaacgaccctcaatcaccttttgtgaccagc
gggctacgtataggtacgccagctatcaccactagagggtttggcattcaacaggtgact
gacctaacccattggatttgcgatgtgttagacgacattcacaacgaagacatgatagcc
accgtacgcgctaacgtgttggcgctgtgtgaagctcacccggtctatcgataa
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