Alteromonas stellipolaris R10SW13: AVL56_02235
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Entry
AVL56_02235 CDS
T04403
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
aaw
Alteromonas stellipolaris R10SW13
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aaw02000
]
AVL56_02235
Transporters [BR:
aaw02000
]
Other transporters
Pores ion channels [TC:
1
]
AVL56_02235
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF1374
Motif
Other DBs
NCBI-ProteinID:
AMJ93235
LinkDB
All DBs
Position
531573..534047
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AA seq
824 aa
AA seq
DB search
MHYKGSTFGYSLVAGAVFTALTSSAVVAQEVTVDEKQVETIEVTATRRSGTLQEVPINIS
AITSDVLAQQNIEDLDSVARWVPGLTVTDQGGRNDSPIIVRGLNTNSSGPGSDGGTVATY
FGEIPLFLNMRLLDVDRVEVLIGPQGTLYGAGTLGGAIRYIPKAVDLDFTTAEITGDVFT
MEESDSLGGEGSFVFNAPIIEGELGVRASLNYFNNPGFIDYNYVVQEGGVSLPDPDWTDS
TAISDNLRQVEDANGEDTLTGRIAVRWLPTDTIDATLTYFFQTQDVEGRSISHYNALSDE
NGLSALVGKYESAYRYEEPREKEDSLLSLEVKADLGFAELVSATGYSKFESDGQRDQTDL
LIRLDYSYEEFPAFSSYTEELSERSTLTQEVRLVSLDDGPLSWIVGGFYYDTDSEGTSKE
FTPNFDVYAIEVWGVEGNYRPDSLEYFSADEIDITEKALFGELTYEITDKWDATIGLRAY
DYEVSARSGVDLPLYYSVFEGRASDSIDLELTEAPTEDDSGTLFKFNTSYKFTSDTMAYA
TISEGFRIGGANGAPACPDNVDDLNNQIVCALPDEQTYGADTTTNYELGVKTNFFNNKLQ
VNTSLFYVDWEDPQVTGATVNGQQTITVNAEGAASKGLELSLRGRANDYLTMYATYAHTK
AELTADAPFLFTAQGEAGTELQDFYDGKDGDRLPGSAEHQFSFGMTYSQEVFGDKMLDVN
YGITAQSDIYTTVGLRQDGEALPGYAISNLNARISSETWSVTLYIDNLFDKYAFVSTRRN
VSDIGEGVYDSVLQPNGTELSRNYGHYILTPRTVGLKFNYKFDM
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgcattataaaggcagcactttcgggtactctttggttgccggcgctgtatttactgct
ttaaccagcagtgcagttgtcgcccaagaagttactgtagatgaaaaacaagtagaaaca
attgaagttactgcaacacgcagaagcggcactttgcaggaagttccaattaatatctcc
gccataacatcggacgtgttggcccaacaaaatattgaagacctagactcagtagcacgc
tgggtgccaggcttgaccgtaaccgatcagggtggtcgaaatgattctcctattatcgtg
cgtggcttgaatacaaattcatctggcccaggttcagatggcggtacggtagcaacctac
tttggtgaaataccgctcttccttaacatgcgtttactcgatgtagaccgtgttgaagta
ctgattgggccacaaggcaccttatatggtgctggtacactcggtggtgccattcgctat
attccaaaagcagttgatttagattttaccacggcagaaattaccggtgatgtattcacc
atggaagagagtgattcactaggtggcgaaggaagttttgttttcaacgcgcctattatt
gaaggtgagttgggtgttcgtgcatcactaaactacttcaataaccctggttttattgat
tacaactacgttgtacaagaaggtggggtttcactgcccgatcctgattggactgacagc
actgccatcagcgataacttacgccaagtggaagatgctaacggtgaagacacgctaaca
ggccgaatagcggtacgttggttacccaccgacaccatagacgctacgcttacctatttc
ttccaaacacaggatgtagagggccgttcaatcagccactataatgcgttgtctgatgaa
aacggtttaagtgcgttagtgggtaaatacgagtcggcttatcgttatgaagagccgcgt
gaaaaagaagattcattattgagcttagaagtaaaagccgatcttggttttgctgaatta
gtgtcggcgacgggctattcgaaatttgaatcagacggtcaacgtgaccaaactgactta
cttattcgcttagactacagctacgaagaattcccagcgttttcttcttacacggaagaa
ttatcggaacgctctacgcttacccaagaagttcgcttagtgtcgctagacgatggtcca
ctatcgtggattgtgggcggtttctattacgacactgatagtgaaggcaccagtaaagaa
tttactcctaactttgacgtgtatgccattgaagtatggggcgttgaaggtaactatcgc
ccagatagccttgaatacttctctgctgacgaaattgatattactgaaaaagcacttttc
ggtgagctaacttatgaaattaccgataagtgggatgccactattggtttacgagcttat
gattatgaagtgtcagcacgctcgggcgtagatttgccactttattactctgtatttgaa
ggtcgtgcttctgattctatcgatttagaattaaccgaagcacctactgaagatgacagc
ggtacgttatttaaatttaatacgagttacaaattcactagcgataccatggcctacgcg
acaatcagcgaaggtttccgtattggtggtgctaatggtgcaccagcgtgcccagacaac
gttgatgatttgaataaccaaatagtgtgcgcattacctgatgagcaaacttacggtgca
gatactacgaccaactatgagcttggcgttaaaaccaacttcttcaacaacaaacttcag
gttaatacctctttgttctatgttgattgggaagacccacaagttactggtgcaactgta
aatggtcagcaaaccattacggttaatgctgaaggcgctgcatctaaagggctagagttg
tcgttacgtggtcgcgcaaatgactacttaaccatgtatgccacgtatgcccatacaaaa
gcagagctaaccgctgatgcgccattcttgtttacagcccaaggtgaagcgggaactgaa
ctacaagatttttatgatggtaaagacggggatcgtctgccgggttcagccgagcaccag
ttttcatttggtatgacatacagccaagaagtatttggcgataaaatgctagatgtgaac
tatggtattaccgcacaaagtgatatttacactacggttggtttacgccaagacggtgaa
gcattgccaggttatgcaatcagtaatttaaatgcgcgtatttcatctgaaacatggtcg
gtaaccttgtacatcgataacctgttcgacaaatatgcatttgtgtctacacgacgtaac
gtaagtgatattggcgaaggtgtatacgacagtgtacttcaaccaaacggcactgaatta
agccgtaactacggccattacatattgacgccgcgtaccgtaggcctgaagttcaactac
aagtttgatatgtag
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