Alteromonas stellipolaris R10SW13: AVL56_02330
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Entry
AVL56_02330 CDS
T04403
Name
(GenBank) hybrid sensor histidine kinase/response regulator
KO
K20974
two-component system, sensor histidine kinase [EC:
2.7.13.3
]
Organism
aaw
Alteromonas stellipolaris R10SW13
Pathway
aaw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AVL56_02330
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aaw01001
]
AVL56_02330
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
aaw02022
]
AVL56_02330
Enzymes [BR:
aaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
AVL56_02330
Protein kinases [BR:
aaw01001
]
Histidine kinases
Other
AVL56_02330
Two-component system [BR:
aaw02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
AVL56_02330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
dCache_1
HATPase_c_2
HATPase_c_3
Mod_r
Motif
Other DBs
NCBI-ProteinID:
AMJ93253
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Position
552598..555408
Genome browser
AA seq
936 aa
AA seq
DB search
MYDKHRWSLTLVLHLLLVVVVGSALNAVPAPFDSSGIAVFGVGVGVYAALRFPPIVAIPI
ALIICVPLWLTHGSIVGKESLSLLPIVVSLFGYKKSLSRVIKVGAGFWSLIFLPILLLEH
ALYEADQPTMMFSGVLVTWVSGVFGLISGHFVFLANKGLKHTNTGSQERVSLHFLFSYFF
SGCFFAASMAVVYLSVALYQDDQEAQIVRYMHQRVAVLEQQLSDFIGQHQKAIAVASQSL
STPYAIEKLEEASSNQLSVLAAHYPEFITFLVADENGNITHSYPPGLLNKAQAVGAANVA
YRPYFYQAMETGGPYLSDVFQGKGFGNDAIVAMSSPIINEYGVPIGIVEGSLSLRSFSTV
DALNLDGFSLLLEDAKGEVIYASDALGLKPLNKAPTYLCDGECDIKIEDGPLNKQWLRLE
GQLPTANWHVSYYYDYRRLLSVMSGYLLTDLLLLLVLSVFGTFMGSVVARMIESPIRRLI
RYIANFTPSEVRREPTLAGSTLHIQELASLNDEFSSLEGRLVDAFKALEFARSKEQALNV
ELAGFNHSLENKIEEKTRHLATALDEAKAASVAKTQFLANMSHEIRTPMNGIIGSCELMM
ELPLPDGARHRTETISTSASHLLMILDSILDWSKIESGKMLLDKRSVSVEQTIDACSVLY
ERSASKKGISINVNIDENVPKAVITDGGKLSQIINNLVSNAIKFTHQGVILIEAKYSQGK
LSCSVTDTGIGIPAEKIESIFDQFEQADASITRDYGGTGLGLAITKGLVELLGGSISVDS
NEGTGTTFCFSFPCEKGDTQEASSNVKAQSLPSTLRVLLAEDNDVNADIVMDMLGSVGVK
RFRAKNGMEAIEAATRHAFDVILMDYQMPVMDGLTASKHIRQQAKNKDKVIIIALTANAY
ADDKAACLAAGMNAHLSKPIRKQVLIDSIARELARV
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgataaacaccggtggtcattaactctggtattacacctgttacttgtagtggtt
gtaggtagtgctctaaacgcagtacctgcgccatttgatagcagcggtattgctgtattc
ggtgtaggggttggtgtgtacgcggcactacggttcccccctatcgtcgccattcctatt
gcgttaattatctgcgtccccttatggctcactcacggcagtattgtggggaaagaaagc
ctgtctttactgcctatcgtagtaagcttatttgggtataaaaaatccctgagccgagta
attaaagttggtgctgggttttggtcgcttattttcctacccattctattattagagcac
gcactttacgaagccgaccagcctacaatgatgttttctggggtgcttgttacgtgggta
agtggcgtttttgggcttatttctgggcactttgtcttcctagcgaataaagggcttaaa
cacaccaatacgggttcgcaagaaagagtctcactgcattttctgttcagctattttttc
tcaggttgtttttttgccgcttccatggcggtggtgtatttatctgtagcgctttatcaa
gacgatcaagaagcgcaaattgttcgctacatgcatcaacgtgttgcggtattagaacaa
cagttgtctgattttattgggcaacaccaaaaagcgatagctgttgcctcgcaatcacta
tccacgccctatgccattgagaagttggaagaggctagcagcaatcagctttcagtttta
gctgcgcactaccccgaattcatcacatttttagtggccgacgaaaatggaaatatcacc
cactcttatccacccgggctgctaaataaagcgcaggccgtcggggctgccaatgtggct
taccgtccttatttttatcaggcaatggaaacgggcgggccgtacctttcagatgttttc
caaggcaaaggctttggaaacgatgctattgttgccatgtcttcacctattattaatgaa
tatggcgtgcctattggcatcgtggagggctcattatcccttcgaagcttctctacagta
gatgcccttaacctcgatggtttttcgcttttactcgaagatgctaaaggcgaggttatc
tacgcgtcagatgcgttgggcttaaaaccactgaacaaagcgcctacgtatttatgcgat
ggtgagtgcgatataaaaattgaagacggaccgcttaacaagcagtggctgaggctagaa
ggtcagctgcctaccgcaaattggcacgttagctattactacgattatcgacgtttattg
tcagtaatgagtgggtatttattgactgatttattgctgttacttgtcttgtctgtattt
ggtacgtttatgggctctgtggtggcacgaatgatagagtctcccattcgcaggctcata
cgttatatcgccaattttaccccttcagaagtgcgcagagagccaaccttggcgggaagt
acattgcatatacaggagctcgcctcacttaatgacgagttcagcagcttagaagggcgc
ttagtcgacgcatttaaagcccttgaattcgctcggtctaaagaacaagcgttaaatgta
gagcttgctggtttcaatcatagcttagaaaataagatagaagagaaaacgcgacatttg
gctacggcgcttgatgaagcaaaagcggcaagcgtagctaaaacccagtttttagccaat
atgagccatgagattcgtaccccgatgaatggcattattgggtcgtgtgaattaatgatg
gaattacccttacctgacggggcacgccatagaacggaaactatttccacttctgccagc
cacctattaatgatccttgatagtattttagattggtcgaaaattgaatctggtaaaatg
ttgctagataagcgtagtgtttccgttgagcaaaccatcgatgcatgcagtgtgctttac
gagcgaagcgcaagtaagaagggcatttcgattaacgtgaatattgatgaaaacgtgcca
aaagcggttattaccgatggtggcaagctaagccaaatcattaataacttggttagtaat
gcgattaagtttactcaccaaggcgtcattttaatagaggccaagtatagccaaggcaag
ctatcttgttcggttactgatacaggcattggcataccagcggaaaaaatagagagtata
ttcgaccaatttgaacaggctgatgcctcgataacccgtgactatggtgggactggattg
ggcttagccattaccaaagggttagtagagctacttggtggcagtatttcagtagacagt
aatgaaggcacgggaaccaccttttgctttagttttccgtgtgagaaaggcgatacgcaa
gaagcttcatccaatgtaaaagcccagtctttaccaagtacgttacgagtattacttgct
gaagataacgatgtaaatgccgatattgtaatggatatgcttggctctgttggcgttaaa
cgctttagggctaaaaatggtatggaagcgatagaggccgcaactcgtcatgcatttgat
gtaattttgatggattaccaaatgcccgttatggatgggcttactgcctcgaaacacatt
cgccaacaagctaaaaataaagacaaggtaatcattattgcattaacggcaaatgcttat
gcagatgataaggcggcatgtctagccgccggtatgaatgcacatttaagcaaaccaatt
agaaagcaggtgttaatcgacagtattgcccgtgaacttgctcgcgtttga
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