Alteromonas stellipolaris R10SW13: AVL56_02790
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Entry
AVL56_02790 CDS
T04403
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
aaw
Alteromonas stellipolaris R10SW13
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aaw03016
]
AVL56_02790
Enzymes [BR:
aaw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AVL56_02790
Transfer RNA biogenesis [BR:
aaw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AVL56_02790
Prokaryotic type
AVL56_02790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AMJ93335
LinkDB
All DBs
Position
complement(634111..635181)
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AA seq
356 aa
AA seq
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MKPLHTQHWNYYYSKPVSTGLFKFQADDFQVVEDLGYEPCGEGEHQFVFVEKINTNTAFV
AEQLARYTKLPLRQVTYAGRKDKYALTRQWFGLHAPGQADFDFSDFELEGVRVIKQTRHN
RKLRTGQLKGNAFTITLRQVVHPEAIEERLQEIAKHGVPNYYGEQRFGVMRVNEQGEVQR
GGNLAMAERMINGETIRHRNKRSMALSALRSWLFNEVISIRLENKTFDKVLTGDALVLTG
SNSFFIDDDKQQDSQQRYEDKDVCPSAPLWGKGDLVTTSEANATEEQVASSHPEVIDFLG
QCGFEQERRAIKIWPSQLEWQSKGDTLTLSFSLPSGCFATSVLRECVETVSPIHSI
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccattacatacccaacactggaattactattacagtaaacccgtatcaaccggc
ttatttaagtttcaagccgacgactttcaagtcgttgaggacttaggctacgagccctgc
ggtgaaggcgagcaccagtttgtttttgttgaaaaaattaataccaatactgcatttgtt
gcagagcaacttgctcgctacaccaaactgccacttcgccaagtgacgtatgcaggtagg
aaagacaaatatgccctcacccgtcagtggttcggtttacatgcaccaggacaagctgat
ttcgacttcagcgattttgagcttgagggggtgcgggtcattaagcaaactcgccacaat
agaaagcttcgtaccggtcaattaaaaggaaatgccttcaccattacactgcgtcaagtt
gtgcatccagaagccattgaagaacgccttcaggaaatcgccaaacatggtgtgccgaat
tattacggcgaacagcgatttggcgtcatgcgggtaaacgagcaaggcgaagttcagcgc
ggtggtaaccttgccatggctgagcggatgataaacggtgaaaccattcgccaccgcaat
aagcgctctatggcactgtccgccctgcgtagttggttatttaatgaggtcatttctatt
cgtttagaaaacaagaccttcgataaggtacttaccggtgacgcattggtattaaccggc
tcgaacagcttctttattgacgatgataaacagcaagatagccagcaacgttatgaagat
aaagatgtatgtccttcggcaccgctgtggggcaagggagacttagtcactacgtcagag
gcaaacgccaccgaagagcaggttgcatcaagtcatccagaagttatcgactttttaggc
caatgtggcttcgagcaagaacgtcgtgcaataaaaatatggccatcgcaacttgaatgg
caaagtaagggtgatacattaacgctatcgttttcattgcctagcggttgtttcgctaca
tccgtacttagggaatgtgttgaaaccgtttcccccattcacagtatttag
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