Alteromonas stellipolaris R10SW13: AVL56_02925
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Entry
AVL56_02925 CDS
T04403
Name
(GenBank) RNA pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
aaw
Alteromonas stellipolaris R10SW13
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aaw03009
]
AVL56_02925
03016 Transfer RNA biogenesis [BR:
aaw03016
]
AVL56_02925
Enzymes [BR:
aaw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
AVL56_02925
5.4.99.29 23S rRNA pseudouridine746 synthase
AVL56_02925
Ribosome biogenesis [BR:
aaw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AVL56_02925
Transfer RNA biogenesis [BR:
aaw03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
AVL56_02925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AMJ93358
LinkDB
All DBs
Position
complement(669828..670613)
Genome browser
AA seq
261 aa
AA seq
DB search
MANPAFVYNPPVQPYLTILYQDDDILVANKPSGLLSVPGKAEEHKDSLISRVNTVFPTAT
VVHRLDMATSGIMVMALNKESHRHISKQFELRQTKKRYFARVFGNVKNSEGEVNLPLICD
WPNRPKQMVDYARGKKALTRYEVVDVIPKVPPQPVNSAASASSYTSPSTSTTSELSETLV
ALYPVTGRSHQLRVHMLELGHPILGDRLYAHAEALSMAERLQLHAESLSFAHPASEDWLT
FQTPIPFTAYAHYSPAPLSID
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggctaatccagcgtttgtttataacccgcccgtacagccctatttaaccattctctac
caagatgatgacatcttggtagcgaataagcccagcggcctgttaagtgtgccaggtaaa
gcagaagaacataaagactcgctcattagcagagttaatactgtgtttcctacggcgacg
gtagtccataggctcgatatggcaacgtcgggtattatggtgatggcgcttaacaaagaa
agccatcgacatatttcaaagcaatttgaattacgtcaaaccaagaaacgttatttcgct
cgggttttcggtaacgtgaaaaacagtgagggagaagtaaatttacccctaatttgtgat
tggcctaatcgccctaagcaaatggtggattatgcgcgaggcaaaaaagctctcacccgt
tatgaagtggtagacgttataccaaaagtaccacctcaacccgttaattcagccgctagc
gctagctcttatactagccccagcactagcactacgagtgagctaagcgaaacgttagtg
gccttgtaccccgttactgggcgctcccaccaactacgtgttcacatgcttgagttaggt
caccctatcttaggtgataggttgtatgctcatgctgaagcgctgagtatggccgaacgt
ttgcagttgcatgcagaaagcttgagctttgcgcatcctgcctcggaagactggttaacc
tttcaaacgcctatcccgtttactgcttatgcccattactcccccgccccactatctata
gattga
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