Alteromonas stellipolaris R10SW13: AVL56_03970
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Entry
AVL56_03970 CDS
T04403
Name
(GenBank) preprotein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
aaw
Alteromonas stellipolaris R10SW13
Pathway
aaw02024
Quorum sensing
aaw03060
Protein export
aaw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AVL56_03970
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AVL56_03970
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AVL56_03970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
aaw02044
]
AVL56_03970
Secretion system [BR:
aaw02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AVL56_03970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Sterol-sensing
Mid1
Motif
Other DBs
NCBI-ProteinID:
AMJ93541
LinkDB
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Position
936565..939192
Genome browser
AA seq
875 aa
AA seq
DB search
MTRFSFRGLVYALVILLGLFSAAPNILPDSMRQHVPQWYSQHTLSLGLDLQGGSHLLLEA
DTDALFARQLDTYSSALFSDLREQNIRYVKHASKQGLSVQFTLSNPDDFYKVKQRASEVA
MQSDGSSALLLTQQVTSQKGVEQQGTASKGISQKGNVIVLELTEEYQAAVVKDAINRSLE
VVRKRLDETGLTEPSVTRQGSDAILVQMPGISDPANVKALLGTTAQMRFHWQTQANNSES
FIRADINDRQYLLEKHVALEGEHITDAAAVFSPETSQPVVTFRLDNEGARQFATMTKNNI
GRVLAVVLDDTVVTAPVINSVIPGGRGEITGSFTMSEAQDVALMLRTGALPVPLHIIEER
TVGPDLGSDAIETGVKSGIAGALGVLVFMLAIYGRWGAIASLALTVNMALVFGVLTLFGA
TLTLPGIAGLILTMGMAVDANILINERIREETKKGRPAGSALKIGFEKAFGTIVDSNFTT
LIAVSLLFVFGSGPVKGFAVTIAIGLITSLFTSVALTKLLMQRATKKHQREPINLSSPLL
TMADKLGPFNFLKSKKLALSVSLILTLCSMALFFKPGLQYGVDFTGGTMMEISAPQLSTE
QLRTVLKEHHFEDIAIQEYGAKNQYLLRAPVSEQSNALSNIGANTGASTEANTVATQGSN
IEVLKQVIQDADSTVVFNKVDVVGPKVSDGFADLSILALLIAGGGMLAYLWFQFEAHFAT
AALLTVLLDLTKTIGFIALTGIEFNLTAVAALLALIGYSINDKVVVLDRVRELLRISPER
SLADIINEAVNSTLSRTVFTSLTTLLALLPMALVGGDAVSSFAVPMVFAVVIGTSSTLFI
TSSLLHMLGKRREQRGKAQLRPTAEEVKASLAHIP
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgacacgattttcatttcgtggcctagtgtatgcgctagttatattactaggcctattt
agcgccgcccccaatattttacccgattctatgcgtcagcatgtaccacagtggtacagc
caacacacgctttcccttggtttggatttacaaggtggttctcacttattgttagaagcg
gataccgatgcgttatttgctcggcagttagacacctattcttcagcactttttagtgac
ttaagagaacaaaatattcgctacgttaaacatgcttctaaacaagggctaagcgttcaa
tttacactttcgaaccccgacgacttttacaaagttaaacaacgggcaagtgaagtggcg
atgcaatctgacggaagtagcgcgttgcttctgacacagcaggtcacttcccaaaaaggc
gttgaacagcaaggcactgcttcaaaaggtattagccaaaaagggaatgtgattgtcctt
gagctgaccgaggaataccaagcagcagtagtaaaagatgccatcaatcgcagcctcgaa
gttgtgcgtaaacggcttgacgaaaccggtctcacagaacccagtgttacccgccaaggt
agcgatgctattttagtgcaaatgcccggtatatcagaccctgccaatgtgaaagcctta
ctaggcacaacggcgcaaatgcgttttcattggcaaactcaggcgaataatagtgagagc
tttattcgcgccgacattaacgataggcagtatttgcttgaaaagcatgtggcacttgaa
ggtgagcatattaccgatgcggcagcggtgtttagccctgaaaccagtcaacccgtggtg
acgtttcgcttagataacgagggtgcacgacaattcgccaccatgactaaaaacaatata
ggccgcgtgctggcagttgtattagatgacacggtagtcactgcaccggttatcaatagt
gttattcccggtggcagaggcgaaattaccggtagctttaccatgagtgaagcacaagat
gttgcactcatgctgcgcacaggggcgttgcctgttccactgcatattattgaagagcgc
accgtggggcctgatttaggaagcgatgctattgaaaccggagtgaaaagcggcattgca
ggggcactgggtgttttagtctttatgctggccatttacggacgttggggcgcgattgcg
agtctagcgcttacggtcaatatggcattggtattcggtgtgcttaccctctttggtgcc
acacttactctccctggtattgctgggctaatactcaccatgggcatggcagtagatgcg
aatatcctaattaatgaacgtattcgtgaggaaaccaaaaaagggcggccagcaggtagc
gcgcttaaaattgggtttgaaaaggcgtttggtaccattgtggattcaaactttaccacg
ctaattgcagttagcttgctttttgtttttggtagcggaccggtaaaaggctttgcggta
accattgcgataggtctgataacctcgctgtttacctcggtagcgctcactaagttgctt
atgcagcgagccactaagaagcatcaaagagagcccattaatttatcgtcgccactgtta
accatggccgataagttaggaccgtttaactttttaaagtctaaaaaattagcgttgagt
gtgtcactgatattaaccctgtgctcaatggcgctcttctttaagcctggcttgcaatat
ggcgtagactttactggcggcactatgatggaaatttctgcgccgcagctttctacggag
cagttgcgcacagtgttaaaagagcaccactttgaagatattgctattcaagagtatggc
gcaaagaatcagtacttattacgtgcaccagtatcggagcaatcgaacgcattatctaat
ataggagctaatacaggagctagcaccgaagctaatacggttgccacgcaaggcagcaat
attgaagtgttaaaacaagtgatacaagacgctgacagcactgttgtatttaataaggtt
gatgttgtggggccgaaagtgagtgatggctttgccgacctatctattttagctttactg
attgctggtggcggtatgctggcctatctatggtttcagtttgaagcgcattttgctacc
gcggccttacttaccgtgctgcttgatttaaccaaaaccattgggtttattgccttaacc
ggtattgagtttaatcttaccgcggtggccgcgctactggccttaatagggtactcaatt
aacgataaagtggtagtgttagaccgtgtgagagagttactgcgcattagcccagagcgc
tcgctggctgatattattaatgaagcggtaaatagcacgcttagcagaacggtatttacc
tcgttaaccacgctgctcgcgttgttacctatggcgctagtaggcggcgacgcagttagt
agttttgctgtacctatggtatttgccgttgttattggcacctcatctactttgtttatt
acttcatcgttactccatatgttgggtaaacgcagagagcaaagggggaaagcacagctt
cgcccaacagccgaggaggtaaaagcgtcgctggcacatataccttaa
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