Alteromonas stellipolaris R10SW13: AVL56_05650
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Entry
AVL56_05650 CDS
T04403
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
aaw
Alteromonas stellipolaris R10SW13
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaw03032
]
AVL56_05650
03400 DNA repair and recombination proteins [BR:
aaw03400
]
AVL56_05650
Enzymes [BR:
aaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AVL56_05650
DNA replication proteins [BR:
aaw03032
]
Prokaryotic type
DNA Topoisomerases
AVL56_05650
DNA repair and recombination proteins [BR:
aaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AVL56_05650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
UBQLN1
Motif
Other DBs
NCBI-ProteinID:
AMJ93840
LinkDB
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Position
complement(1330909..1333605)
Genome browser
AA seq
898 aa
AA seq
DB search
MSDNANEILPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMAKIAHELLADLDKETVDFVPNYDGTEHIPEVLPTKVPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCIALIKDPSITIDDLMLHIPGPDFPTAAMISGRKGIDDAYRTGRGKI
YMRAKAEIETEDNGKETIIINEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDGM
RIVVEVKRNESAEVLLNHLYANTQLQTVFGINMVALDNGQPKVFNLKETLEAFILHRREV
VTRRTVFELRKARDRAHILEGLAIALANIDPIIELIKASPGPADAKKALVAQGWDLGDVS
QMLERAGDDAARPDWLMPEFGIRDGQYFLTEQQAQAILDLRLHRLTGLEHEKILEEYKQL
LEVIAELLHILNSPERLMEVIEEELEKIRDEFGDERRTEITAASHDIDIEDLIEQEDVVV
TLSREGYVKYQKLNDYEAQRRGGRGKSATKMKDEDFIEKLLVANTHDHILCFSTRGRLYW
LKVYQLPFASRNARGRPIVNILPLEDNERITAILPIKEFEEGKFVLMATANGTVKKTDLS
LYSRPRSSGIIAVNLNEGDELIGVDITHGDDDIMLFSDAGKVVRFNEKLRDSETGNVKLD
PETGEELLALRPMGRTATGVRGIRLQDDQRVVSLIVPRGDGPILTATENGFGKRTPLEDY
PAKSRATQGVVSIKVSERNGKVVGAVQVDESNEIMLISDQGTLVRTRVGEVSVVGRNTQG
VRLIRTVENEHVVGLQRIEEVVEELLELDEDGNPIAIEEPIEQEENAAQDGDSSTTEE
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataacgctaacgaaatcctccccgttaatattgaggaagagttaaagaactcc
tatctcgattacgcgatgagcgttattgtcgggcgagcattgcctgacgtaagagatggt
ttgaagcctgtacaccgccgtgtgttgttcgcaatgaacgaactgaaaaacgacttcaat
aaaccatacaagaaatctgcccgtgtggtaggtgatgtaattggtaagtatcacccacat
ggtgattctgcggtatacgatactattgtacgtatggcccagccattctcgcttcgctac
atgttggtagacggccaaggtaactttggttcggtagatggcgattcagccgctgcgatg
cgttataccgaaatacgtatggcaaaaattgcccacgaacttcttgccgacctcgataaa
gaaaccgtcgacttcgtacctaactacgatggtactgaacacattccagaagtgttacct
actaaggttcctaacttactggtaaacggttcttctggtatcgcggtaggtatggcaact
aacattccgccacataacttaactgaagttattaacggctgtattgcccttattaaagac
ccatcaattacgattgatgacttaatgcttcatatccctggtcctgatttcccaactgcc
gctatgatcagtggccgtaaaggtattgatgacgcttaccgtactggtcgcggcaaaata
tacatgcgcgccaaagcggaaattgaaacggaagataacggtaaagaaaccattatcatc
aacgaaattccgtaccaagttaacaaagctcgcctaattgaaaaaattgctgagctagtt
aaagaaaagcgcatcgaaggtatctctgcactacgtgacgagtctgataaagacggtatg
cgtattgttgttgaagtaaaacgtaacgaatcagcggaagtactacttaaccatttatat
gccaatactcagctacaaacagtattcggtattaacatggttgcgttagataacggccaa
cctaaagtctttaacttaaaagagaccttagaagcctttattctacatcgccgtgaagta
gtaacccgtagaaccgtatttgaactacgtaaagcccgcgatcgtgcacacatccttgaa
ggtctagctattgcgctagccaacatcgatccaatcattgagctaattaaagcctctcct
ggccctgctgatgcgaaaaaagcattagttgcacaaggttgggatttaggcgatgtatcg
caaatgcttgaacgtgcaggtgatgatgctgcacgtccagattggttaatgcctgagttt
ggtattcgtgatggacaatacttccttaccgaacaacaagcacaagctattctagacctt
cgtctgcatagacttactggtcttgagcacgaaaaaattcttgaagaatataaacagctt
ctagaagttattgctgaactacttcacatccttaatagcccagagcgattaatggaagtg
attgaagaagagcttgaaaaaattcgtgacgaatttggtgacgagcgccgtactgaaatt
actgctgctagtcacgatattgatattgaagacctgattgaacaagaagacgttgtcgtt
accttgtctcgtgaaggctatgtgaagtatcaaaaactaaacgattatgaagcgcagcgt
cgtggtggccgtggtaaatcggcaactaagatgaaagacgaagacttcattgagaaacta
ttggtggccaatacccatgaccacattctttgtttctcaacccgtggccgtttgtactgg
ctgaaagtttatcaattgccgttcgcgagccgtaatgcccgtggccgtccaattgtgaac
attcttcctttagaagataacgagcgtattactgcaattttacctatcaaagaatttgaa
gaaggtaagtttgtattaatggctacggctaacggtacagtgaagaaaacagatttaagc
ctttattcacgtccacgttcaagcggtattattgccgttaacttgaacgaaggtgatgaa
ctaattggtgttgacattacccatggtgacgacgacattatgttgttctcagacgcaggt
aaagtggttcgctttaacgaaaaacttcgtgatagcgaaacaggtaacgttaagttagat
cctgaaactggtgaagaactactcgcactacgtccaatgggccgaactgctacgggtgtt
cgtggtatcagattacaagacgaccaacgcgttgtttctctaattgtacctcgtggtgat
ggtcctatccttactgccacagagaacggttttggtaaacgtacgccacttgaagattac
ccagcgaagagccgtgctacacaaggtgtagtatctattaaggtttctgagcgtaatggt
aaagtggttggcgcggttcaagttgatgaatccaatgaaattatgcttatttctgaccaa
ggtaccctagtacgtacccgcgttggcgaagtttcagtagtaggaaggaatacccaaggt
gttcgtcttatccgcactgttgagaacgagcatgttgttggcttacaacgtatagaagaa
gtagttgaagaattgctagagctagatgaagatggcaatccaatcgctatagaagaacct
attgagcaagaagaaaacgctgcacaagacggcgacagctcaacgacagaagagtag
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