Alteromonas stellipolaris R10SW13: AVL56_06160
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Entry
AVL56_06160 CDS
T04403
Name
(GenBank) LacI family transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
aaw
Alteromonas stellipolaris R10SW13
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aaw03000
]
AVL56_06160
Transcription factors [BR:
aaw03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AVL56_06160
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_23
HTH_Tnp_ISL3
HTH_10
HTH_28
MarR_2
HTH_IclR
HTH_5
HTH_Crp_2
HTH_3
HTH_38
MarR
HTH_24
HTH_AraC
HTH_11
HTH_29
Sigma54_DBD
HTH_17
HTH_Tnp_4
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AMJ93930
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Position
1442938..1443945
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AA seq
335 aa
AA seq
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MKIMKKRTTISDIAAHLGIHKTTVSRALKDSSSISKALSLKIKKAAKDLNYIPNRAAQSL
SIQNNKTIALLLPSFGNNVFNDVVSGVKAVADELGYALMIGDATYSELGEERIVESYIQQ
AVSGFILTSSRHTDETIKMLKTTDAPVAEIMDVSDSTFDINYGVDHFNAGKEMTDYLVNV
KGRKKIAFCSLLLDWRAVLRKRGWEQALHNAQLQDDMCLQSRADASFQAGAELLVESLHK
WPDLDAIFFVSDELAAGAVMECNRRGIKPGKDIDICGFNDLSFAKAIYPSLTTVSTPRRE
MAELATRSLISVIEGKSVSETSKVFPYHIKIRETA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatgaaaaaacgtacaaccatttcagatatcgcagcacatttaggtattcac
aaaactacggtttcccgcgcacttaaagattcaagtagtatttctaaagcgttatcgctg
aaaataaagaaagcggctaaggacttaaattacatccccaaccgtgcagcacaaagttta
tctattcaaaacaataaaacgattgcgttactactcccttcatttggaaacaatgttttt
aatgatgtagtttcaggcgtgaaagccgttgctgatgaacttggctatgcattaatgatt
ggtgacgctacctattcagaattaggagaggaacgtattgttgaatcttatattcaacaa
gcggtttcaggttttattctcacttctagtcgccacaccgacgaaaccataaaaatgtta
aaaaccaccgatgcaccggtggcggaaattatggatgtgtcggattctacttttgatatc
aactatggtgtagatcatttcaatgcgggaaaagaaatgactgactatttagtaaacgta
aagggcagaaagaaaattgctttttgttcattgctgcttgattggcgtgctgtacttaga
aaacgaggctgggagcaagcccttcataatgcacagttgcaagatgatatgtgccttcag
tcacgtgctgatgcctcatttcaagcgggcgctgaattgctagtggaatcgcttcacaaa
tggccagacttagatgccatattttttgttagtgatgaacttgcagccggagctgtaatg
gaatgcaatcgccgggggatcaaaccgggaaaagacattgatatatgtggtttcaacgat
ttgagctttgcgaaagctatttacccttcccttaccacggtatccacaccaagaagggag
atggctgaattagccacccgttcattgatatcagttattgaaggtaaaagtgtaagcgaa
acaagtaaagtgtttccttaccatattaaaattagggaaaccgcctag
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