Alteromonas stellipolaris R10SW13: AVL56_06350
Help
Entry
AVL56_06350 CDS
T04403
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aaw
Alteromonas stellipolaris R10SW13
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaw03032
]
AVL56_06350
03400 DNA repair and recombination proteins [BR:
aaw03400
]
AVL56_06350
Enzymes [BR:
aaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AVL56_06350
DNA replication proteins [BR:
aaw03032
]
Prokaryotic type
DNA Topoisomerases
AVL56_06350
DNA repair and recombination proteins [BR:
aaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AVL56_06350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
SH3b_T
Motif
Other DBs
NCBI-ProteinID:
AMJ93967
LinkDB
All DBs
Position
complement(1484385..1485419)
Genome browser
AA seq
344 aa
AA seq
DB search
MTIGQIVDGGTPHPHLTIKRIPCGKGAYYRYTSGRKVAGQRVLRRIKSLAIPPNWKSVTI
SRDPKASIQAIGLDAKGRKQYLYHPDWHKQQQAEKFKRLTVFGQKVPEFREYCRTLVNGE
QWTIERASALVCLLLDYTGVRIGNPQYSKENKTYGLTTLRRKHVQEATVEKVSLEYSGKH
SKRRTITIDDPLLASLVCECTQLQGYSLFRYQLADGSWCDIHSEDVNAFIHEHLGDNFSC
KDFRTWAASRFALQSFPDVDRYLREGRNRKWPNSLSSHVSKMLGNTPSVCRQYYIHPKLY
SVFNEKSTFENLLKTLAQGNEQLCDPIERDLSTEKLLLSIISSE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgactatagggcaaatcgttgatgggggtacgcctcatccgcacctaacaattaagcgc
attccttgcggcaaaggtgcctattatcgatataccagcggtcgaaaggtagcaggccag
cgtgtgctgcgtagaatcaaatcacttgccattcctcctaactggaaaagcgtcaccatt
agtcgtgaccctaaggcaagtattcaagccattggcctcgatgctaaagggcgaaaacaa
tacctttatcatccagattggcataaacagcaacaggcggaaaaattcaaacgtttgaca
gtattcggtcagaaagtacctgaatttcgagaatattgcagaacactcgtcaatggcgag
cagtggacaatagaacgggcatcagccttggtgtgcctgttattagattacactggcgta
aggataggcaaccctcagtacagcaaagaaaataaaacctacggcttaactacacttcgc
cgcaaacatgttcaagaagcaacggtagaaaaagtgtctcttgaatattctggtaaacac
agtaagcgacgcaccattacaattgacgatcccttattagcctcgttagtgtgtgaatgc
actcagcttcagggttacagcttatttcggtatcagctagctgacggctcttggtgtgat
atccatagtgaagatgtaaatgcattcattcacgagcatttaggcgacaattttagctgc
aaagattttcgaacttgggcagctagtcgttttgcgctgcaaagcttcccagacgtagac
aggtacttgcgagaaggacgtaaccgtaagtggccaaactcgttgagttcacatgtgtct
aaaatgctaggaaatactccttctgtttgcaggcagtattacattcacccgaagttatat
tctgtgtttaacgagaaaagtacgttcgaaaacttgttgaagaccctagcgcagggcaat
gagcaactttgcgatcccattgagcgagatttaagcactgaaaagcttttgttgtcgatt
atttcatctgagtga
DBGET
integrated database retrieval system
