Alteromonas stellipolaris R10SW13: AVL56_08825
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Entry
AVL56_08825 CDS
T04403
Name
(GenBank) nodulation protein NfeD
KO
K14657
LysR family transcriptional regulator, nod-box dependent transcriptional activator
Organism
aaw
Alteromonas stellipolaris R10SW13
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aaw03000
]
AVL56_08825
Transcription factors [BR:
aaw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AVL56_08825
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AMJ96518
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Position
2062623..2063531
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AA seq
302 aa
AA seq
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MRFEQLDLNLLVALDILLEEQNITRSAERLHLSQSATSGILSRLRAFFEDDLLVQIGKKM
QPTPFALELQGPVAGVLATVRGSIIGKKANNPEQSERHFKIIASDYIIQVLLSHVVVEVA
KSAPKVTFEFLSPFAHEINILAKGGADLMMAPEAVMLDAYPNIPLVNDELVCIADINNEL
LGGKLSLEEFNSFGHVSVGFARASHLSIEPWLIETMEINRRVEIITNDFSTMIYTLLNTN
RIAILPRHFADVHAQRGAIKIVKLPFDAPRLKESMMWHPTLENDPMHRWLRQKILDGAAK
FH
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgaacagcttgaccttaacttactcgtagccttagacatattactagaagag
caaaatatcactcgtagcgcagagcgcttgcacctttcccagtctgccaccagcggtatt
ttatcgagattaagagcattttttgaagacgatttgttagtacaaattggcaaaaagatg
cagccaacaccttttgccctagagttacaagggccagtggcaggcgtacttgctactgta
cggggttcaatcattggtaaaaaagccaataatcctgagcaaagcgagcgtcatttcaaa
atcattgcttctgattacatcatccaagtattactcagccatgtagtagttgaagttgcc
aaatcggcacccaaagtgacctttgaatttctatcgccttttgcccatgaaattaatatt
ctggctaaaggcggcgccgacttgatgatggcaccagaggcggtgatgttggatgcctat
ccaaatattcctctcgtgaatgacgaattagtctgtatcgctgatataaataatgagctg
cttggaggtaaactgtctttagaggagtttaattcgttcggtcatgtatctgtgggtttt
gctcgggcaagtcacttaagtattgagccctggttaatcgaaacgatggaaatcaatcga
agagtagagatcattaccaatgacttttcaactatgatctataccctactgaatactaac
cgtattgccattttaccgaggcacttcgccgatgtgcatgctcagcgtggtgcgatcaaa
atcgtcaaattacccttcgatgctccaagattaaaagaaagcatgatgtggcaccccacc
ctagaaaatgatccaatgcatcgctggttgcgacaaaagattttagatggcgcagccaag
ttccactaa
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