Alteromonas stellipolaris R10SW13: AVL56_08890
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Entry
AVL56_08890 CDS
T04403
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
aaw
Alteromonas stellipolaris R10SW13
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aaw03000
]
AVL56_08890
Transcription factors [BR:
aaw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AVL56_08890
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_28
HTH_20
HTH_23
MarR_2
HTH_AsnC-type
HTH_29
IcmF-related_N
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AMJ94405
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Position
2074632..2075819
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AA seq
395 aa
AA seq
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MHINTRHLLCALKIKECGTLSEAASQIHLTQSALTQGINKLEAGLGHTLFNRSHAGMQPT
EVGELFLLRIERAFEHLNEFVSILFANDKAKRQTFIRAITSRQLTALLHVVELQSYTAAA
QYLGLSQPTLHRTIKDLEQFCEQALLQRSPTGVEPTWRAKQLRRYASLFFAELQQGIDEM
HEFNGQVNGSLRIGSLPLARSEIVPLAVLQLNDEFPEASISIVDGPYGEQFNSLLHGQLD
LIVGALRSPSPDTVQHQLFKDQLSIVVKANHPLVTRQSITATELQQFDWVAPAKSTPARH
VFSQIFVSRGLAPPSHVIECSSLVAVRGILLNSERAALLPARQVEVEVRAGLLVVCPMTL
PDTDREIGLTMRKNWHPTKMQSRFLEIIQMIVKNA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaatacacggcatttactttgtgccctaaagataaaggaatgtggcactttg
agtgaggctgccagtcaaatccatttgactcaatctgctctcacccaaggtattaataag
ttagaagcaggacttggtcatacactttttaatcgctcccatgcaggtatgcaacctact
gaagtcggtgagctatttttgttgcgtatagagcgtgcctttgaacacttgaacgaattt
gtcagcattttatttgccaacgacaaagcgaaacgccaaacttttatacgcgcaatcact
agtcggcaactgacagcattgctccacgttgtagaattacaaagttataccgccgccgct
caatacttaggtttgtcgcaacctactttgcaccgcaccatcaaagaccttgaacagttt
tgtgaacaagctttattgcaacgctctccaactggcgtagaacccacttggcgagccaaa
caactgcggcgttacgccagtttgttttttgcagaattacagcaaggcatcgacgaaatg
catgagtttaatggtcaagtaaacggttcattgcgcataggtagtttgcctttagctaga
tcagagattgtgcccttagcggttttacagcttaatgatgaattccccgaagcgagtata
tccattgtagatggcccctacggtgagcaatttaatagcttgttacatgggcaacttgat
ttaatagtgggtgccctacgctcccccagtccagataccgtgcagcaccagttgtttaag
gatcaactcagtatagtagtgaaagctaatcatccgctggtaacgcgccaatccatcaca
gcaaccgaattacaacagttcgattgggtagcgccagctaaaagcacaccagcacgtcat
gtattcagccagatttttgtgagcagaggcttagcgccgccatcccatgtgattgaatgt
agctctttagtagcggtgcgtggcattttgcttaacagcgaacgcgcagctttgttaccc
gcccgacaagtagaagtggaagtacgcgctggcttacttgttgtttgccctatgacttta
cctgatacagatagagagataggcttaactatgcgtaaaaattggcatccaactaaaatg
caaagtcgatttttagagattattcagatgattgtaaaaaacgcttaa
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