KEGG   Alteromonas stellipolaris R10SW13: AVL56_10030
Entry
AVL56_10030       CDS       T04403                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
aaw  Alteromonas stellipolaris R10SW13
Pathway
aaw02020  Two-component system
aaw02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:aaw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AVL56_10030
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AVL56_10030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aaw03021]
    AVL56_10030
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:aaw02035]
    AVL56_10030
Transcription machinery [BR:aaw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AVL56_10030
Bacterial motility proteins [BR:aaw02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    AVL56_10030
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 UPF0122 HTH_23 GerE CT_C_D HTH_38
Other DBs
NCBI-ProteinID: AMJ94600
LinkDB
Position
complement(2339810..2340541)
AA seq 243 aa
MNSKAAAYQQQTDKSQLVERHASLVKRIAHHLMARLPASVLVDDLIQSGMIGLLEAARNF
DGSKGASFETFAGIRIRGAMLDEIRKGDWTPRSVHKNGRAITEAISQVEGETGRDARDVD
IAAKMNVSMQDYHQMLNEVNAGKLVGIEDLGVSEDVISTEKNRGSDAPLEDLMQGAFQKA
LAHAITTLPEREAIVLSLYYDEELNLREIGEVLDVSESRVSQIHSQAMLKLKSRMKSWQV
DEE
NT seq 732 nt   +upstreamnt  +downstreamnt
ttgaatagcaaagcagccgcttatcaacagcaaacggacaagtcacaattagttgagcgt
cacgcttcgctggtgaagcgaatagcacaccacttaatggcgagattaccagccagtgtt
cttgtcgatgatttaatccagtcaggtatgattggactgctagaagctgcacgaaatttt
gacggttccaaaggtgcaagtttcgaaacctttgcaggtattcgtattcgcggcgccatg
cttgatgaaataagaaaaggtgattggacacctcgttctgttcataaaaatggaagggca
atcaccgaagctatctctcaagttgaaggtgaaacaggccgagacgcgcgagatgttgat
attgcagctaaaatgaatgtcagcatgcaagattatcatcaaatgcttaacgaagtgaat
gctggaaaattggtgggtattgaagacctaggtgtttctgaagatgttatttctacagaa
aaaaaccgaggcagcgatgcaccgttagaagatttgatgcaaggggctttccaaaaagcg
ctagcacatgctattactacattacccgaacgggaagcgattgtactttctttatactat
gatgaagaactgaaccttagagaaattggtgaagttcttgatgttagtgaatcgcgagtg
agtcaaattcatagtcaggccatgttaaaactcaaatcacgaatgaaatcgtggcaagtt
gacgaagaatag

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