Alteromonas stellipolaris R10SW13: AVL56_12520
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Entry
AVL56_12520 CDS
T04403
Name
(GenBank) heparinase
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
aaw
Alteromonas stellipolaris R10SW13
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
AVL56_12520
Enzymes [BR:
aaw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
AVL56_12520
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
DUF4962
Alg17C_C
RelB-like
PrkC-like_PASTA-like
Motif
Other DBs
NCBI-ProteinID:
AMJ95041
LinkDB
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Position
complement(2929861..2932101)
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AA seq
746 aa
AA seq
DB search
MNIKKFTLTLLTVGISMSPFTIQAKEHPNLILTKPGVERMRDNLGQVPLFDSTLSSVKKE
VDAEIAMGIDTPIPKDFSGGYTHQRHKQNFFVAQKAGVLFQVLNDEKYAKYIRDMLFQYE
AMYKDLPLHPQERSYSRGKLFWQCLNDSNWLVYMSQAYDAIYDYLSEQERETLETNLFRP
FADFISLENPQFFNRVHNHSTWGIAAVGMIGLVMNDEELIQRALYGIEDDGLVVGGKDND
GGTIKVEGQRKGFFANLEEPFSPDGYYTEGPYYQRYAMYPFLIFALAMDNSRPDLKVLQH
KDNVLLKGVNALLNLSDADGEFFPINDAQKGMSYYKDSLVSAVDLAYFYGDKNPQLLSVV
EKQGEVLLQESGLQAAIDVRDNKAEPFIKRSVNLSDGVNGKQGGIGVLRQGDEDMTLVFK
YAAQGLSHGHYDKLSFSMYEKGEEVLQDYGLARFVNIEQKGGGNYLKENKTWAKTTIAHN
TLSVNQEMHFKGDYDVASQHHSELFTFDAEQDNIKVVSATEENAYPGTLMHRTMAMIVND
NFEKPFVLDIMRVESDTKNQYDFPFYYFGQVLDMNFKYDSPTSLHPLGEDNGYQHLYLEG
KGMAAGHNTKFSWLNNGKYYTITSVTNNDDEVLLTRIGANDPEFNLRRDPGIILRRTDTQ
DTLFVSVVEPHGSYSPVSESSQNSKSSITDLKVVLDSDEYTGVSITDIKGEKQLFIISNV
DVSKSAKHSVKIDGKKVSWTGPYFYQ
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgaatataaaaaaatttaccctaaccctgttaaccgttggtatcagcatgtcgccgttt
accatacaagccaaagaacatcctaatcttattcttactaagcctggagtagaaagaatg
agagacaatttgggtcaagtaccattatttgattcaacgttatcaagtgttaaaaaagaa
gtagatgctgaaattgccatgggtattgatacaccaattcctaaagatttttctggcggt
tatactcatcaacgccataagcaaaacttctttgtcgcccaaaaggcgggagtgttgttc
caagttttaaacgatgaaaaatacgcgaagtacattcgcgatatgttgtttcagtatgaa
gccatgtataaagatctaccgcttcaccctcaagagcgctcgtattcacggggtaaattg
ttttggcagtgtttaaacgacagtaattggttggtttacatgagccaagcttacgatgct
atttacgattatctttcagagcaagagcgtgaaaccctagaaactaacctgttccgtccg
tttgctgattttatctcgcttgagaacccacagtttttcaaccgcgttcacaaccatagc
acttggggcattgccgcggtgggtatgataggcctcgttatgaacgacgaagagcttatt
cagcgtgcgttatatggcattgaggacgatggcttagtagttggcggtaaagacaacgac
ggtggcactattaaagtagaaggccaacgtaaaggtttcttcgctaacttagaagaacct
ttctcgccagatggttattataccgaagggccatattaccagcgttatgctatgtatccc
ttccttattttcgccttggcaatggacaatagccgtccagacctaaaagtacttcagcat
aaagataatgtgttactaaaaggtgtgaatgccttacttaacttatctgatgctgacggt
gaattcttcccaatcaatgatgctcagaaagggatgtcatattacaaagactctctggtt
agcgcggtagatttagcctatttttacggtgacaaaaatccgcaactattgagtgttgtt
gaaaagcaaggtgaggtcttgttacaggaatcgggactgcaagcggctattgatgtgcgc
gataacaaagctgagccatttattaagcgatcagtaaatctgagcgatggtgtgaatggt
aaacaaggtggtataggtgtactgcgccaaggtgatgaagatatgaccttggtatttaag
tatgcagcccaaggcctaagccatggtcactacgataaactttctttttcaatgtatgaa
aagggtgaagaagttctacaagattatggtttagctcgttttgttaatattgaacaaaaa
gggggcggtaactacttaaaagagaataagacctgggcgaaaacgactattgcgcacaat
acgttatctgttaaccaggaaatgcactttaaaggcgactacgatgttgcaagtcagcac
cactcagagttattcacttttgatgctgagcaagacaatatcaaagtggtgagtgcaaca
gaagaaaatgcctatccaggtacgttaatgcatcgcactatggcgatgattgttaatgat
aattttgaaaaaccgtttgtgttggacattatgcgtgttgaatcggataccaagaatcaa
tacgactttcccttttactactttgggcaagtattagatatgaacttcaaatacgattcg
cctaccagtttgcacccacttggcgaagataatgggtatcaacacctatatcttgaaggt
aaaggaatggccgcagggcataacacgaagttctcatggttaaataatggtaagtattac
acgatcacttccgttaccaataatgatgacgaagtgttgcttactcgtattggagcaaat
gacccagaatttaatcttcgtcgtgacccaggcattatccttcgtaggacagacacccaa
gacaccttattcgtctctgtggttgaacctcatggttcttacagccctgtaagtgaatca
tcacaaaattcaaaaagcagtattacagatttgaaggttgttcttgatagcgacgaatat
actggcgtttcaattaccgatatcaaaggtgaaaagcagctgtttattatttcgaatgtg
gacgtgtcgaaaagcgcgaagcatagcgtgaaaatagacggtaaaaaggtaagctggaca
gggccttacttttatcagtaa
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