Alteromonas stellipolaris R10SW13: AVL56_12575
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Entry
AVL56_12575 CDS
T04403
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38,39,40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aaw
Alteromonas stellipolaris R10SW13
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aaw03016
]
AVL56_12575 (truA)
Enzymes [BR:
aaw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AVL56_12575 (truA)
Transfer RNA biogenesis [BR:
aaw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AVL56_12575 (truA)
Prokaryotic type
AVL56_12575 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AMJ95051
LinkDB
All DBs
Position
complement(2942617..2943408)
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AA seq
263 aa
AA seq
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MGRIALGIEYDGASVHGWQRQKDVASVQEYLEKALTVIANKPIIVFCAGRTDAGVHATGQ
IVHFDCDVERPERAWTLGINANMPDSIAVTWAKPVSDDFHARFSATHRRYRYVIYNSRMR
PAILHNGVTHEYRELDAEKMHEAAQALVGEHDFTTFRASLCQSKTPHRTVSSVSVHRQGR
YVVLDIRANAFLHHMVRNITGSLLCIGAGEQPVDWMAHLLTLKDRAKAATTAKPNGLYLV
DVTYPEHFGIPKSPLGPLFLPES
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggggcgaatcgccttaggcatcgagtatgatggtgcatcggtacatggttggcaacgt
caaaaagacgtggctagcgtgcaagaatacctagagaaagcactcaccgttatcgcaaat
aagcctattatagtattttgtgctggtcgcaccgatgccggtgtgcatgcaactggccaa
atagtccattttgactgcgatgtagagcgtccagagcgtgcttggacacttggcattaat
gctaacatgcctgactcaatagccgtaacatgggctaaacctgtctctgatgattttcac
gcccgcttttcggctactcaccgtcgttatcgctacgttatttataactcacgtatgcga
cctgctatcctgcacaatggtgtaactcacgaatatcgagagttagacgccgagaaaatg
catgaagccgcacaggcgctggtaggtgaacacgatttcactacatttcgagcatcactg
tgtcaaagcaaaacgcctcaccgaacagtgagtagcgtgagtgtacatagacaaggtcgt
tatgtggtgttggatattcgtgcgaatgcatttttgcatcatatggtacgaaatatcacg
ggttcattgctttgcattggggcaggggagcaacctgtcgattggatggcacacttactt
accttaaaagaccgcgctaaagccgctactaccgctaaacctaacgggttgtatttggtt
gatgtaacttaccctgagcactttggcatacctaaatcgcctcttgggcctctttttctt
ccagaatcttaa
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