Alteromonas stellipolaris R10SW13: AVL56_13210
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Entry
AVL56_13210 CDS
T04403
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
aaw
Alteromonas stellipolaris R10SW13
Pathway
aaw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AVL56_13210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaw03400
]
AVL56_13210
Enzymes [BR:
aaw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AVL56_13210
DNA repair and recombination proteins [BR:
aaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AVL56_13210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
YihI
TACC_C
Motif
Other DBs
NCBI-ProteinID:
AMJ95164
LinkDB
All DBs
Position
3083137..3083391
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AA seq
84 aa
AA seq
DB search
MVAKVTKKTDSPSFEETLTELDAIVNEMENGELPLNVALEKFERGIALSREGQKSLEQAE
QKVKILLNEQGESALHPLPEDEQP
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgaaagtgacgaaaaaaacagattctccctcgtttgaggaaacccttaccgaa
ttagatgccatcgttaatgagatggaaaacggtgagttaccattaaacgttgcacttgaa
aaattcgagcgaggcattgccctttctcgtgaaggccagaagtcgttagagcaagccgag
caaaaagttaaaattttgcttaatgagcaaggcgaaagcgcattacaccctcttcctgaa
gacgagcaaccttaa
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