Alteromonas stellipolaris R10SW13: AVL56_13535
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Entry
AVL56_13535 CDS
T04403
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
aaw
Alteromonas stellipolaris R10SW13
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaw03032
]
AVL56_13535
03036 Chromosome and associated proteins [BR:
aaw03036
]
AVL56_13535
03400 DNA repair and recombination proteins [BR:
aaw03400
]
AVL56_13535
DNA replication proteins [BR:
aaw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AVL56_13535
Chromosome and associated proteins [BR:
aaw03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AVL56_13535
DNA repair and recombination proteins [BR:
aaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AVL56_13535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AMJ95220
LinkDB
All DBs
Position
complement(3152538..3152810)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDQIAAGADISKAAAGRALDAFTDSVTAALKDGDQVALVGFGTFSVRERSARSG
RNPQTGETIQISAAKVPSFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtctcaacttatcgaccaaattgctgctggcgcagatatttcaaaagcagct
gccggccgcgctctagatgcattcactgactcagtaactgcagcacttaaagacggtgac
caagtggcactagtcggtttcggtactttctcagtacgtgagcgctctgctcgtagtggt
cgtaatccacaaactggtgagactattcagatttcagcggcgaaagttccttctttcaaa
gctggtaaagctctgaaagacgcttgtaactaa
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